Paenibacillus polymyxa SC2: PPSC2_22140
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Entry
PPSC2_22140 CDS
T01335
Symbol
sigW13
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppm03021
]
PPSC2_22140 (sigW13)
Transcription machinery [BR:
ppm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PPSC2_22140 (sigW13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
UPF0122
HTH_24
HTH_Tnp_ISL3
HTH_23
HTH_WhiA
Motif
Other DBs
NCBI-ProteinID:
ADO58673
UniProt:
E3EBJ9
LinkDB
All DBs
Position
complement(4986385..4986951)
Genome browser
AA seq
188 aa
AA seq
DB search
MDNMESRLVRLVQKGDQRAFAELVELYKDRIFHLSYRMLGNRHEAEDLVQETFLRVYRNL
EKYDHGQKFSTWIYRIATNLCIDRLRRRKPTYSLDAEMNDQEGVDGYAMLASEELTPEGS
TLLSETQALIHDAIDSLPDKYKTIMVLRYLQELSLQEISDVLNLPVTTIKTRVHRGRDFL
RKKLEHKL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtggataatatggaaagccgcttggttaggctggtgcaaaaaggtgatcagcgagctttt
gcggagttagtcgagttatataaagatcggatttttcatctttcctaccggatgctaggt
aatcgtcatgaggcggaggatttggtgcaggaaacttttttgcgtgtgtatcgcaacttg
gaaaagtatgaccatgggcagaagttctcaacctggatttatcggattgctacaaatctg
tgcattgatcgtctgcgaaggagaaaacctacatactcacttgatgctgaaatgaatgat
caagaaggtgttgatgggtacgccatgcttgctagtgaagagcttacccctgaagggagt
acgctgttgtcggaaacgcaagctttaattcatgacgccattgacagccttccggataaa
tacaagacgattatggttttacggtacttgcaggagctttccttgcaggaaattagcgat
gtgctcaatctcccagttaccacaattaagacaagagtacacaggggacgggattttcta
cgcaaaaaattggagcacaagctataa
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