Paludibacter propionicigenes: Palpr_2403
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Entry
Palpr_2403 CDS
T01362
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn00061
Fatty acid biosynthesis
ppn01100
Metabolic pathways
ppn01212
Fatty acid metabolism
ppn02024
Quorum sensing
Module
ppn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Palpr_2403
00071 Fatty acid degradation
Palpr_2403
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Palpr_2403
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppn01004
]
Palpr_2403
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppn04147
]
Palpr_2403
Enzymes [BR:
ppn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Palpr_2403
Lipid biosynthesis proteins [BR:
ppn01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Palpr_2403
Exosome [BR:
ppn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Palpr_2403
Exosomal proteins of breast cancer cells
Palpr_2403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ADQ80535
UniProt:
E4T741
LinkDB
All DBs
Position
complement(2910345..2912249)
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AA seq
634 aa
AA seq
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MKPTIIDLLNSSVERFAQNPFLWEKTTTEFVPTTYLETQQQAQHLAAGLIQLGIEMYDKV
ALLSEGRNAWIIGELGILHAGAVNVPLSIKLEESNDLIFRLIHSETKYIFVSGGQLKKIR
AIIKSLPLIKKVIILDDQTEYEELEIPISKLIADGKQLLKTQPEAVQRRVEAIKPDDLAN
ITYTSGTTADPKGIMLTHRNYTANVEQALTLMDISTSTRTLLILPLDHCFAHVAGFYSFM
ALGASVGTVQSGKTGMETLKNIPINIKELKPNILLSVPALAKSFKKNIEANIRAQGDMVN
RLFNFALNLSYSYNKEGYNKGKGLQILKKPLIVLFDRILFKKVREAFGGNLDFFIGGGAL
LDIDLQRFYYAIGIPMFQGYGLSEATPIISSNGLKHHKLGSSGYLVKPLELKIYDSEGKQ
LPNYEKGEIVIKGENVMAGYFKNEKATAETIKDGWLHTGDMGYMDNDGFLYVVGRFKSLL
ISSDGEKYSPEGIEESIADNSRYIDQVVLYNNQNPYTTALIVPNKEALKRYVKEKKPQLS
WDSNEAKELALNKLQKEINEYKKGGRLEGLFPERWLPSAVAVIGEPFSEQNGLVNSTMKI
MRGKVEERYAARIEGLYSTGAKSIQTPENLEALK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctaccatcatagacttactcaacagcagtgtagaaagatttgcacaaaatcct
tttttatgggaaaaaacaaccaccgagtttgttcctacaacttaccttgaaacgcaacaa
caagcgcaacacctggctgccggtttaatacagcttggaatagaaatgtatgataaagtg
gcattgctttcggaaggtagaaatgcctggattataggagaactgggcatactgcatgca
ggcgcagtgaatgttcccttatcaataaaactcgaagaaagtaatgatttgatattccgc
ctaattcattctgaaacaaaatatatttttgtttcgggcggtcaattgaaaaagatacgt
gctataataaagtcgcttccactgataaagaaagtaatcatacttgatgaccagacagaa
tatgaggagctcgagatcccgataagcaaattgattgcagatgggaaacaacttttgaaa
acgcagcccgaagcggtacaacgcagagttgaggcaataaaacctgatgatctggcaaat
ataacttatacttcaggcactacggccgatccaaagggaataatgctaacacacagaaat
tacacggcaaatgtagagcaagcattgacgctgatggacatttccacctctacccgaaca
ctactaattcttccactggatcattgctttgctcatgtggcgggcttctacagtttcatg
gctttaggcgcaagtgttggaaccgttcagagcggtaaaaccggcatggagacattaaag
aatatacctataaatatcaaagaattaaaaccaaatatattgcttagtgttccagcactt
gctaaaagcttcaaaaagaatattgaggctaacatacgagcgcagggagatatggtaaac
cgcttgtttaactttgccctaaatctatcttattcttacaataaagaaggatacaacaaa
ggaaaaggattacagatattgaaaaagccacttatcgtattattcgacagaatattattc
aagaaagtgcgcgaagcatttggtggaaatcttgatttcttcattggaggcggtgcatta
ttagatattgatctacagcgcttttattatgcaataggtattcctatgtttcagggatac
ggactgtccgaggcaactccgatcatttcatccaacgggctgaaacatcacaaacttgga
tcatcgggctacttggtaaagccgttggaactgaaaatttacgattctgaaggaaagcaa
cttccaaattacgaaaaaggggaaatcgtgataaaaggcgagaatgtcatggcaggatac
tttaaaaatgaaaaagccactgccgaaacgataaaagacggttggttacatactggcgat
atgggctatatggacaatgatggatttttgtatgtagttggacgatttaaaagtctgctg
atatcgagtgatggagaaaaatacagtccggaaggaattgaagaatctatagctgataac
tctcgatacatagatcaggtggtgctctacaacaaccagaacccttacacaactgctctg
attgttcccaataaagaagcgcttaaacgctatgtaaaagaaaagaaaccgcaactaagc
tgggatagtaatgaagctaaagagttagcgctgaataaacttcagaaagaaataaatgaa
tacaaaaagggcggaagattggaaggactgtttcccgaacgctggcttccttcagctgta
gctgtaattggcgagccgttcagcgaacaaaacggattggtaaacagcaccatgaaaata
atgcgtggtaaagtagaagaacgatacgccgcgagaatagaaggcttgtattccaccgga
gcaaaaagcatacaaactcctgaaaacttagaagctctaaaataa
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