Pandoraea pnomenusa DSM 16536: LV28_08485
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Entry
LV28_08485 CDS
T03411
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00521
Streptomycin biosynthesis
ppnm00523
Polyketide sugar unit biosynthesis
ppnm00541
O-Antigen nucleotide sugar biosynthesis
ppnm01100
Metabolic pathways
ppnm01110
Biosynthesis of secondary metabolites
ppnm01250
Biosynthesis of nucleotide sugars
Module
ppnm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LV28_08485
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LV28_08485
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LV28_08485
Enzymes [BR:
ppnm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LV28_08485
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AIU26572
UniProt:
A0A378YK56
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All DBs
Position
1288917..1289465
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AA seq
182 aa
AA seq
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MQLIATAIPDVKVVEPKVFGDTRGYFFESFNQRNFDTALGETLTFVQDNQSRSARGVLRG
LHYQVQQPQGKLVRVLQGEIYDVAVDIREGSPTFGKWVAEVLSAENKKQLWIPAGFAHGF
VVTSETAEVLYKTTDYWAPQFERCIRWDDPTLAIPWPLEGITPLVSDKDRQGMLFADYRH
EG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgattgctaccgccattcccgacgtcaaggtcgtcgagccgaaagtgttcggc
gatacccggggctatttcttcgagagcttcaaccagcgcaacttcgacaccgcgctgggc
gagacgctcacgttcgtgcaggacaaccagtcgcggtcggcgcgcggcgtgctgcgcggg
ttgcactatcaggtgcagcagccgcaaggcaagctcgtgcgcgtgcttcagggggagatc
tacgacgtggccgtcgacatccgcgaaggctcgccgaccttcggcaagtgggtcgccgaa
gtgctgagtgccgagaacaagaagcagctgtggattcccgcggggtttgcccatggattc
gtcgtgacgtcggagacggccgaggtgctgtacaagacgaccgactattgggcgccgcaa
ttcgagcgttgcatccgctgggacgatccgacgctggcgattccctggccgctggagggc
atcacgccgctcgtctccgacaaggaccgacagggcatgctgttcgcggactaccggcac
gaaggttga
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