Pandoraea pnomenusa RB38: DA70_21820
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Entry
DA70_21820 CDS
T03067
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00521
Streptomycin biosynthesis
ppno00523
Polyketide sugar unit biosynthesis
ppno00541
O-Antigen nucleotide sugar biosynthesis
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01250
Biosynthesis of nucleotide sugars
Module
ppno_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DA70_21820
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DA70_21820
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DA70_21820
Enzymes [BR:
ppno01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DA70_21820
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AHN76822
UniProt:
A0A378YK56
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Position
complement(4160572..4161120)
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AA seq
182 aa
AA seq
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MQLIATAIPDVKVVEPKVFGDTRGYFFESFNQRNFDTALGETLTFVQDNQSRSARGVLRG
LHYQVQQPQGKLVRVLQGEIYDVAVDIREGSPTFGKWVAEVLSAENKKQLWIPAGFAHGF
VVTSETAEVLYKTTDYWAPQFERCIRWDDPTLAIPWPLEGITPLVSDKDRQGMLFADYRH
EG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgattgctaccgccattcccgacgtcaaggtcgtcgagccgaaagtgttcggc
gatacccgtggctatttcttcgagagcttcaaccagcgcaacttcgacaccgcgctgggc
gagacgctcacgttcgtgcaggacaaccagtcgcggtcggcgcgcggcgtgctgcgcggg
ttgcactatcaggtgcagcagccgcaaggcaagctcgtgcgcgtgcttcagggggagatc
tacgacgtggccgtcgacatccgcgaaggctcgccgaccttcggcaagtgggtcgccgaa
gtgctgagtgccgagaacaagaagcagctgtggattcccgcggggtttgcccatggattc
gtcgtgacgtcggagacggccgaggtgctgtacaagacgaccgactattgggcgccgcaa
ttcgagcgttgcatccgctgggacgatccgacgctggcgattccctggccgctggagggc
atcacgccgctcgtctccgacaaggaccgacagggcatgctgttcgcggactaccggcac
gaaggttga
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