Paenibacillus polymyxa M1: PPM_2686
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Entry
PPM_2686 CDS
T01968
Symbol
mutM3
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPM_2686 (mutM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_2686 (mutM3)
Enzymes [BR:
ppo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PPM_2686 (mutM3)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PPM_2686 (mutM3)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPM_2686 (mutM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CCC85623
LinkDB
All DBs
Position
complement(3153774..3154592)
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AA seq
272 aa
AA seq
DB search
MPELPEMENYRILLSKQILDIPITGVTVSREKSINTEVETFKKQLLGATVVYLERRGKHL
IFHLNTGKRLVLHLMLGGLLYLGTEEQRPDRTIQIELDFSGVKLYFIGLRLGYLHLLTAK
ETDEALSDLGPDPLDRRMTLENFTARLKGRRGILKTTLVNQQVFSGIGNCYSDEIAYIAG
FTPGSKVQNIVQSPEKVEKLYHATQSVLREATAEGGYMEMPLMEGDTLTGGFDHQCRVYD
REGEESPSGGKIVRVELAGKKAFYCPVQQHDA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaaatggaaaactacagaatcttattgtcaaaacaaattttggac
attccgattactggagtgacggttagccgcgaaaagtccattaatactgaagtggaaacc
tttaaaaagcaattgctgggtgcaaccgttgtatatttagagcgtcggggtaagcatttg
atttttcatttaaacacgggtaaacgacttgtgcttcatctaatgttgggaggactgttg
tatctgggaacggaggagcaacgtccagaccgtacgattcagatcgaattggattttagc
ggagtgaagctttattttatcggactgcgcttaggttatctgcacttgctgacggctaaa
gaaacagatgaagctttgtcagacctgggaccagatccgttagaccgtcgtatgacgttg
gagaattttacagcacgtctaaaaggacgacggggaattttgaaaacaacactggtaaat
cagcaggttttttcggggattggaaactgctattcggacgaaattgcttatatcgccgga
tttacaccgggttccaaggtacaaaatattgtacagtctccagaaaaagtggaaaagcta
tatcatgctactcaatccgtacttcgtgaagctactgcggagggcggttatatggaaatg
cctctaatggagggagacacgctaacaggtggctttgatcatcagtgtcgagtatatgac
cgtgaaggagaagaatctccaagcggtgggaaaattgtaagagtcgagctggcgggaaaa
aaagcattttattgcccggtgcagcagcatgatgcctaa
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