Paenibacillus polymyxa M1: PPM_3897
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Entry
PPM_3897 CDS
T01968
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00860
Porphyrin metabolism
ppo01100
Metabolic pathways
ppo01110
Biosynthesis of secondary metabolites
ppo01120
Microbial metabolism in diverse environments
ppo01240
Biosynthesis of cofactors
Module
ppo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
ppo_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PPM_3897 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppo04147
]
PPM_3897 (hemB)
Enzymes [BR:
ppo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
PPM_3897 (hemB)
Exosome [BR:
ppo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PPM_3897 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
CCI70706
LinkDB
All DBs
Position
complement(4509297..4510295)
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AA seq
332 aa
AA seq
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MSVPFTRHRRLRQSAAIRSMVRETVLNPADFIQPIYVTFGTGVKQEISSMPGVYRFSLDR
LEEELKEISELGIPAVLLFGIPETKDSVGTSAFVDNGIVQEATRLIKSRYPELLVVADTC
LCEFTDHGHCGMVHMHEHDGEVCGEVLNDESLEVLVRTAVSQARAGADIIAPSNMMDGFV
QAIRQGLDLEGFSHIPIMSYSVKYASAFYGPFREAADSAPQFGDRKSYQMDPANAREALR
EAESDVMEGADMLMVKPSLSYLDVMRTIKDQFDLPMVAYNVSGEYAMVKAAALQGWIDEK
AMVLEILTSMKRAGADMIITYSAKDAARWLKQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcccttttactagacatcgtcgtttgcgccagtcggctgccattcgcagcatg
gtgcgtgaaacggtattgaatccggctgactttatccaaccgatctacgtaacatttggt
actggagtgaaacaggagattagctccatgccaggcgtataccgtttttctttggatcgg
ctggaagaagagctgaaagaaattagtgagcttggcattcctgctgtgctcctgtttggc
ataccagaaaccaaagacagtgtagggacttcagcttttgtggacaacggtattgttcag
gaagctactcgtttgatcaagtcacgttatcccgaactgctggtcgtggcagacacttgc
ttgtgtgagtttacggaccatggacactgcggtatggtgcacatgcatgagcatgatggt
gaggtatgcggtgaagtattgaatgatgaatctctggaggtgctggtacgtacagccgtt
tctcaggcgagagccggtgcagatattattgctccttctaatatgatggacggttttgta
caggcgattcggcaaggactagatctggaaggtttttcacatattccgattatgtcgtat
tccgtcaaatatgcgtctgccttttatggtccttttcgggaagctgctgattctgcaccg
cagttcggtgaccgcaaatcctatcagatggaccctgccaatgcacgtgaggcgttgcgg
gaagcggagtctgacgtgatggagggtgcggacatgctgatggtgaagccttctctttct
tatctggatgtaatgcgcaccattaaggaccaatttgatttgcctatggtggcttacaac
gtaagtggtgaatatgcaatggtcaaagcggcagccctccaaggctggattgatgaaaaa
gcgatggtactggagattctgacaagcatgaagcgtgccggtgcggatatgattattacc
tattctgccaaggatgcggcaagatggttgaagcaataa
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