Paenibacillus polymyxa M1: PPM_4496
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Entry
PPM_4496 CDS
T01968
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00521
Streptomycin biosynthesis
ppo00523
Polyketide sugar unit biosynthesis
ppo00541
O-Antigen nucleotide sugar biosynthesis
ppo01100
Metabolic pathways
ppo01110
Biosynthesis of secondary metabolites
ppo01250
Biosynthesis of nucleotide sugars
Module
ppo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PPM_4496 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PPM_4496 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PPM_4496 (rfbD)
Enzymes [BR:
ppo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
PPM_4496 (rfbD)
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Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
NAD_binding_10
adh_short
DapB_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
CCI71303
LinkDB
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Position
complement(5211164..5212039)
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AA seq
291 aa
AA seq
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MKVLVTGASGQLGKDVVNVFQGQGLDVFGYDREQLDITDLEQVVKIVGQYQPDAIIHCAA
YTAVDAAESDIDTAYQVNASGTRNMALAAEKAGAKLVYISTDYVFDGTAEQPYHEYDNTN
PQSIYGKSKRSGEILAQTLSSRYFIVRTSWVYGLHGNNFVKTMLKLGQEKPHLQVVNDQK
GAPTYTVDLARFLAELVQTDKYGVYHASNSGACTWYEFTQAIFQDAAGLLGAKITAKLDP
CSTEQFPRPAARPRNSVMEHIAIRTNGLNDLRNWREGLRDFLKEYLENSNK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgctggttactggagcatccggtcaacttggcaaagatgtagtaaacgttttt
cagggccagggacttgatgtctttggatacgatcgggaacagctggatattacggacttg
gagcaggttgtaaagatcgtgggacagtaccaacctgatgctatcatccactgtgcagcg
tatacggcagtggatgcagccgagtctgatatagacacggcttaccaagtcaatgcgtcg
ggaacacgcaatatggcgttggctgcggaaaaagcaggagccaagctggtgtatatcagc
acggattacgtgttcgatggaacagcggagcaaccgtatcatgagtatgacaatacgaat
ccgcagagtatttacggaaagtccaagcggtccggagagatactggcccaaacactttcc
tccagatattttattgttcgtacttcttgggtatacggattacacgggaacaattttgta
aaaacaatgctgaagcttggacaggaaaagccacatcttcaggttgtgaacgaccagaaa
ggcgcacccacctatacggtggatttggctcgctttttggcagaattggttcaaactgat
aagtatggcgtatatcatgcgtccaatagcggtgcttgtacttggtatgagtttacgcaa
gctatttttcaggatgcggcaggactattaggtgccaagataacagcaaaattggaccca
tgtagtacagaacaattccctaggcctgcagcacgtccacgtaattcggtcatggagcat
atagcgattcgaaccaatgggctgaatgatttgcgaaattggcgtgaaggattacgggat
tttttaaaagagtatctggaaaattccaataaatag
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