KEGG   Pectobacterium polaris: BJK05_20055
Entry
BJK05_20055       CDS       T05195                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppoa  Pectobacterium polaris
Pathway
ppoa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppoa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BJK05_20055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppoa03021]
    BJK05_20055
Transcription machinery [BR:ppoa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BJK05_20055
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 GerE Sigma70_ECF HTH_28 HTH_11 Xre-like-HTH HTH_24 PCI
Other DBs
NCBI-ProteinID: ASY82149
LinkDB
Position
complement(4570072..4570614)
AA seq 180 aa
MSSANIDTSADLHQLYCQHHGWLQGLLRKRLGNLCDAADLAQDVFLRLLLKPRQFDSHAG
ARAYLSVMAQGMCVDLWRKREIERVWLTSLAEQPEPVALSAEDSNIILETLYQVDAMLRA
LPEKVRAAFIMAQVQGLPYREIATALGVSERMVKKYMAQAMLHCVLLEAEIDADGQAVHS
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtcatcagccaatattgatacctcagcagatctgcatcagctctattgtcagcatcat
ggctggctgcaagggctattgcgcaaacggctggggaatctgtgtgatgcggccgatctg
gcgcaggatgtatttttacggctcttgctgaaaccgcgccagttcgacagccacgcaggc
gcgagggcttacctgagcgtgatggcgcaaggcatgtgcgtcgatctctggcgcaaacgg
gaaattgagcgcgtctggctcacctcattagccgaacagccggagccagttgccctgtcg
gcggaagacagcaatatcattctcgaaacgctgtatcaggtcgatgccatgctacgggcg
ctgccagaaaaggtgcgcgccgcctttatcatggcgcaggttcagggattgccctatcgg
gaaattgctacggcgctgggcgtttccgaacgtatggtgaaaaaatacatggcgcaggcc
atgctgcactgtgtgctgctggaagcggagatagacgcggacggtcaggccgttcattca
tga

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