Pectobacterium polaris: BJK05_20055
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Entry
BJK05_20055 CDS
T05195
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJK05_20055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoa03021
]
BJK05_20055
Transcription machinery [BR:
ppoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJK05_20055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
GerE
Sigma70_ECF
HTH_28
HTH_11
Xre-like-HTH
HTH_24
PCI
Motif
Other DBs
NCBI-ProteinID:
ASY82149
LinkDB
All DBs
Position
complement(4570072..4570614)
Genome browser
AA seq
180 aa
AA seq
DB search
MSSANIDTSADLHQLYCQHHGWLQGLLRKRLGNLCDAADLAQDVFLRLLLKPRQFDSHAG
ARAYLSVMAQGMCVDLWRKREIERVWLTSLAEQPEPVALSAEDSNIILETLYQVDAMLRA
LPEKVRAAFIMAQVQGLPYREIATALGVSERMVKKYMAQAMLHCVLLEAEIDADGQAVHS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagccaatattgatacctcagcagatctgcatcagctctattgtcagcatcat
ggctggctgcaagggctattgcgcaaacggctggggaatctgtgtgatgcggccgatctg
gcgcaggatgtatttttacggctcttgctgaaaccgcgccagttcgacagccacgcaggc
gcgagggcttacctgagcgtgatggcgcaaggcatgtgcgtcgatctctggcgcaaacgg
gaaattgagcgcgtctggctcacctcattagccgaacagccggagccagttgccctgtcg
gcggaagacagcaatatcattctcgaaacgctgtatcaggtcgatgccatgctacgggcg
ctgccagaaaaggtgcgcgccgcctttatcatggcgcaggttcagggattgccctatcgg
gaaattgctacggcgctgggcgtttccgaacgtatggtgaaaaaatacatggcgcaggcc
atgctgcactgtgtgctgctggaagcggagatagacgcggacggtcaggccgttcattca
tga
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