Paenibacillus polygoni: QPK24_21370
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Entry
QPK24_21370 CDS
T09587
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03420
Nucleotide excision repair
ppog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QPK24_21370 (pcrA)
03430 Mismatch repair
QPK24_21370 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_21370 (pcrA)
Enzymes [BR:
ppog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK24_21370 (pcrA)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QPK24_21370 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QPK24_21370 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
AAA_14
GBS_Bsp-like
Motif
Other DBs
NCBI-ProteinID:
WIV18846
LinkDB
All DBs
Position
complement(4435364..4437694)
Genome browser
AA seq
776 aa
AA seq
DB search
MQSIDIQDAISRLNPPQREAVVTTEGPLLIMAGAGSGKTRVLTHRIAYLVATKKAAPWSI
LAITFTNKAAREMQDRVSKLVGGSQGRDIWVSTFHSMCVRILRKDIDRIGFTANFSILDS
SDQLSVIRNCMKDLNIDTKKFEPKAVQAAMSAAKNELITPAQYEAQIGDYFEGIVAKVYT
KYQQRLRANNSLDFDDLIMTTIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLTRM
LADKHHRICVVGDSDQSIYRWRGADITNILNFEKDYPEACTIMLEQNYRSTSNILDAANA
VINLNTGRKPKKLWTDKTGGEKIKVYRGDSEHDEGYFVASEISKNVKNGKSYQAHAILYR
TNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILAYLKLLSNPDDDISLTRIINVPK
RGIGDTTVAKLAAAAGERGISIFRVLEIVDDLGFAGRTRNALVEFYDMIAALHQMVEYLS
VTELTEKILEMSQYRLEFQNENTLESKARLENIDEFLSVTMEFEKNNEDKSLVSFLTDLA
LIADIDSMNDDEEEQADAVVLMTMHSAKGLEFPVVFVIGMEEGVFPHSRAFMDEEELEEE
RRLAYVGITRAEQQLFLTCARMRTLFGRTTANPPSRFLDEIPEELKEDTKIARDRYRRGT
GNNTGGSYSGRGFSSTGTGSNFGSGARKDLSLGGSTASAASRVTVTTGSGGSQTSAAGAS
KDFAAGDKVQHGKWGTGTIVSIKGTGNDTELQIAFPAPVGLKRLLAGFAPITKVES
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccattgacatacaagacgcaatttcgcgccttaaccccccgcagcgagaagct
gtagtgactaccgaaggaccgctgctgattatggctggagcaggaagtggtaagacccgt
gtgcttactcaccggattgcttatcttgtagccactaagaaagcagcaccttggagcatt
ctagctattacgtttacaaataaagcagcacgtgaaatgcaggatcgtgtgtcgaaactc
gttggcggctctcaaggtcgggatatctgggtttctacattccactccatgtgtgtaaga
atcctgcgcaaagatattgatcgtatcggttttaccgcgaatttcagtatcttggattca
tcggatcaattgtctgtcattcgtaactgtatgaaagacctgaatatcgatactaagaaa
tttgaacccaaagccgttcaggctgcaatgagcgccgcgaagaatgaactaattacaccg
gcacaatatgaagcacagattggcgattattttgagggaattgtggcgaaagtatacacc
aagtaccaacaacgtctcagagcgaacaattcgcttgattttgacgatttgattatgact
acgattcagctttttaaagaagtacccgaggttctcgacttctaccagaagaaattccaa
tacattcatgtggacgagtaccaggatacaaaccgtgcacagtatatgctcacccgtatg
ctcgctgataagcatcaccggatttgtgtcgtaggggatagtgaccagtcgatttaccgc
tggcgcggagcagatatcacgaacattttgaactttgaaaaagattacccagaagcttgc
accatcatgctggagcagaactaccgttccacttcaaatattctagatgcagcaaatgcc
gtgattaatctgaatactggccgtaaaccgaagaaactttggaccgacaaaacaggcggc
gagaagattaaagtctatcgcggggattccgaacatgatgaaggttattttgtagcttcc
gagatcagtaaaaatgtgaagaatgggaaatcctatcaagctcatgctattttatatcgt
accaatgctcagtcccgggtaattgaggaaattctcattaagtctgatattccttaccaa
atcgtcggcgggattaagttctatgatcgaaaagaaatcaaggatattcttgcgtatctc
aaacttctctctaacccggacgatgatatcagcttgacgcggattattaatgtaccgaag
aggggcatcggtgatacgacggtagcgaagcttgctgcagcagcaggagaacgaggaatc
tctattttccgtgtgcttgagatcgttgacgatcttggctttgcaggccgtacacgtaat
gcattagtagaattctatgatatgattgctgctttgcaccagatggttgagtatctttcg
gttaccgaactgacagagaaaattctcgagatgagccagtatcgccttgagttccagaac
gagaatacccttgaatccaaagcgcgtctcgaaaatattgatgagttcctgtctgtaacg
atggaattcgagaaaaataatgaggacaagtccctggtctctttcctgacagaccttgct
ctcattgcggatattgacagtatgaacgatgatgaagaagaacaggcggatgcggttgtc
ctgatgacgatgcacagtgcaaaaggtcttgaattccctgttgtgtttgtcattggtatg
gaagaaggggtattcccgcacagcagagcctttatggacgaagaggaactagaggaagaa
cgtcgtttggcttatgtagggattacacgtgcagagcagcagttattcttgacctgtgct
cggatgcgtactttattcggtcgtacgacagctaacccgccatcccgcttcctggatgag
attccagaagaactcaaagaggataccaagattgcacgtgaccgctatcgccgcggaact
ggaaataatacaggtggttcctacagcggcagagggtttagcagcacgggtacaggaagt
aactttgggagcggtgcacgtaaggaccttagtcttggcggatcgaccgcttctgctgct
tcacgtgtaacagttacaacaggttcaggaggttctcagacatctgctgcaggagcatcc
aaagattttgcggcaggcgataaggtgcagcatggtaagtggggaacaggaacgattgtt
tctattaaaggtacaggcaacgacacagagcttcagattgccttccctgcacccgttgga
ctcaaacgtttgcttgcgggattcgcacctattacgaaagtagaatcttaa
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