Pollicipes pollicipes (gooseneck barnacle): 119089619
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Entry
119089619 CDS
T08250
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119089619
09122 Translation
03013 Nucleocytoplasmic transport
119089619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119089619
03041 Spliceosome [BR:
ppoi03041
]
119089619
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119089619
Spliceosome [BR:
ppoi03041
]
Complex C
Other components
EJC/TREX
119089619
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119089619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
119089619
NCBI-ProteinID:
XP_037068295
EnsemblRapid:
LOC119089619
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MFRFAETFASFMSDVSKCEKGEDVGTTILQIEADFTGADGGDFDKKACLDHVLRKRVSAV
VSAADGPPVRECHLRAALQLSVGLARAERCSPTTPIVLLADSFDALPLDGAQALFAFVEE
NVATWKEETFFNACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPLSERSGLNVI
SEFNLDNLTAFGDGGDELADAEDADDGEAAAPPQPQVSSGPPLDYNLYRKFWALQDFFRN
PNQCYSKVPWKAFNAYTTDVLAAFSGFRLDESSGSHSSQLGSEESQQYFAKYLTSQKLLQ
LQLSDAMFRRYVLVQFLILFQYLTSQVKFKSETQSLSEAQQAWVRDTQQAVYRLMAETPP
QGQLFADTIRSILKREENWNAWKNDGCPAFKPPAAEETPPEPAAGRPAPRRRPKRKVGDV
LRHAEAKKKFLMGHPELTRLWNVCPDNMEACKTSKRDFLPPLDTFFDEAITQMDPATMVE
DQYKVINNGDYGWRALRLLARRSPHFFAAAQKIPNSLPDYLDTILKKVANDIPKFSGGNG
AGDASLTAADETVADGAAEAEELRAEEAPEEAAPARRVHRLTEPLAGQLAARLGADWKRL
ASRLGFQSDEVDYFVSEQPTAEAQAAMMFRQWMDNEREEATQEELLYALEAVKLDTAVRE
LFDPEVRGETDAPADS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgttcagatttgcagagacctttgccagctttatgtctgatgtgtctaaatgtgaaaaa
ggagaagatgttggaacaacaattcttcaaattgaggctgacttcactggtgctgatgga
ggggactttgacaagaaggcatgcctggaccatgtgctgcggaagcgggtgtcggcggtg
gtgtcggcggcggacgggccgccggtccgcgagtgtcaccttcgcgccgccctccagctg
tctgtggggctggcgcgcgccgagcgctgctcgcccaccactcccatcgtgctgctggcc
gacagcttcgacgcgctgccgttagatggcgcgcaggcgctgttcgccttcgtcgaggag
aacgtggccacgtggaaggaggagacgttcttcaacgcgtgcaagaacaacctgctgcgc
atgtgcaatgatctgctgcggcgcttgtcccgctcgcaaaacacggtcttctgtggccgg
atcctgctgttcctggctaagttcttcccgctgtcggagcggagcggcctgaacgttatc
agcgagttcaacctggacaacctgacggcgttcggcgacggcggcgacgagctggccgac
gccgaggacgccgacgacggcgaggccgcggcgccgccccagccccaggtgtcgtccggg
cctccgctcgactataacctgtaccgcaagttctgggctctgcaggacttcttccgcaat
ccgaaccagtgctactcgaaggtcccctggaaggcgttcaatgcgtacacaacggatgtg
ttagctgccttctcaggatttcgactcgacgagtcatccgggtcacattcgagtcaactg
ggatcggaggagagccagcagtacttcgccaagtacctgacgtcgcagaagctgctgcag
ctgcaactcagcgacgccatgttccggcgatacgtgctcgtccagttcctgatcctcttc
cagtacctcacctcccaggtcaagttcaaaagcgagacgcagtcgctgtcggaggcgcag
caggcctgggtgcgcgacacgcagcaggctgtctaccggctgatggccgagacgccgcct
cagggccagctgttcgccgacaccatcaggagcatactgaagcgtgaggagaactggaac
gcctggaagaacgacggctgtccggcgttcaagccgccggcggcggaggagactccgccg
gagccggcggctggccggccggcgccgcgccgccgccccaagcgcaaggtcggagacgtg
ctccgccacgccgaggccaagaaaaagtttctcatgggacaccccgagctcacccggctg
tggaacgtgtgccccgacaacatggaggcctgcaagacgtccaagcgcgacttcctgccg
ccgctcgacacgttcttcgacgaggccatcacccagatggacccggccaccatggtagag
gaccagtacaaagtcatcaacaacggcgactacgggtggcgcgcgctccggctgctggcg
cgccgctcgccgcacttcttcgccgccgcgcagaagatccctaactcgctgcccgactac
ctggacaccatcctgaagaaggtggccaacgacataccgaagtttagcggcggtaacggt
gccggcgacgcctcgctgacggccgccgatgagacggtggcggacggcgcggccgaggcc
gaggagctgcgcgctgaggaggcgcccgaggaggcggcgccagcgcggcgcgtgcaccgg
ctcaccgagccgctggccggccagctggcggcgcggctcggggccgactggaagcggctt
gcttcacggctcggattccagtcggatgaggtggactacttcgtaagcgagcagccgacg
gcggaggcgcaggcggccatgatgttccgccagtggatggacaacgagcgcgaagaggcc
acccaggaggagctgctgtacgcccttgaggccgtcaagctggacaccgccgttcgggag
ctgttcgacccagaggtgcgcggagagacggacgccccggccgatagctag
DBGET
integrated database retrieval system
