Pollicipes pollicipes (gooseneck barnacle): 119089923
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Entry
119089923 CDS
T08250
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119089923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119089923
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119089923
Spliceosome [BR:
ppoi03041
]
Complex A
U2 snRNP components
U2 related factors
119089923
Complex B
119089923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdAMP_rec
GH18_BT1044-like
Motif
Other DBs
NCBI-GeneID:
119089923
NCBI-ProteinID:
XP_037068626
EnsemblRapid:
LOC119089923
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MKKRRERIEKWRAERRVKEMEQVKKDLEKGVLLENLQVPKKKWTLDEDESDEDEPRRAAR
QEAEKNGSSEGPAVKDEPADPTPADEDEDEVDPLDAFMQGVHDEVRKISKATRAGAGPGP
GGGGGGGGAVPGGGGGGDAAPGAGGAEAAHKKAVVIRAVKARAAPTAETKDKGELMEQNQ
DGLEYSEEEEEMDIHEANEKLAQKGKKELMKIDHNKIVYQPFRKNFWVEVPELKAMTPSE
VDAYRAELEGVKVKGKEVPKPIKTWSQAGLSKKMMDILKKNNYEKPTPIQAQGIPIILAG
RDMIGVAKTGSGKTLAFVLPMMRHIADQPELLDTDGPIAIIMAPTRELCLQIGKECRKFA
RPLGIRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLVRVTYIVLD
EADRMFDMGFEPQVMRIIDNVRPDRQCVLFSATFPRQMEALARRILLKPVEVQVGGKSIV
CKDVEQHIVILDEAQKFFKLLELLGTSAQQESTLIFVDKQEAADDLLRDLMKAMYPCMAL
HGGIDQFDRDSTINDFKSGKVNLLIATSVAARGLDVKHLTMVINYDCPNHYEDYVHRCGR
TGRAGNHGKAYTFLTEDNAKQAGDIIKALELSESLVPSDLKHLWDQYKEQQSSEGKKVRT
GGGFGGRGFKFDENEAQNTSDRKKFEKAALGLQDSDDEDVSEDMDMKIESMLAPKRIVKE
VKPQNGGGGGGGGQGGSGASGTAGTPSGLPGLMTTPVFGGAAGDKLELARRLALRINAQR
NLGPDNRGASQQTAEAVMSGRGSQPLITAKMVAEQLAAKLNTRLNYIPEERSEEEPEPEE
TFTKYEEELEINDFPQHTRWRVTSKEALAQISEYSEAGITVRGTYYAPNAKIPEGERKLF
LAIESTSELAVSKAKAEITRLIKEELVRAQTSHHSGGNRGRYKVL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgccgcgagcggatcgagaagtggcgcgcggagcgcagggtcaaggagatg
gagcaggtcaagaaggacctggagaagggcgtcctgctggagaacctgcaggtgcccaag
aagaagtggacgctggacgaggacgagtcggacgaggacgagccgcggcgcgccgcccgt
caggaggccgagaagaacggctcgtccgaggggccggccgtgaaggacgagccggccgac
ccgacgccggcggacgaggacgaagacgaggttgacccgctcgatgccttcatgcagggc
gtgcacgacgaggttcgcaagatcagcaaggcgacgcgcgccggcgctggccccggccca
ggcggtggtggtggcggcggcggagccgtcccgggcggcggcggcggcggtgacgcggcg
ccgggcgccggcggggcggaggcggcgcacaagaaggcggtggtgatcagggcggtgaag
gctcgcgcggcaccaaccgccgagaccaaggacaagggcgagctgatggagcagaatcag
gacggcctggagtactcggaagaggaggaggagatggatatacacgaggcgaatgagaag
ctggcgcaaaaaggcaagaaggagctgatgaagatcgaccacaacaagatcgtgtaccag
ccattccgcaagaatttctgggtggaggtgcctgagctgaaggccatgacccccagcgag
gtggacgcctaccgcgcagagctggagggtgtcaaggtcaagggcaaggaggtgccgaag
ccgatcaagacgtggtcgcaggccggtctcagcaagaagatgatggacatcctgaagaag
aacaactacgagaagccgacgccgatccaggcccagggcatccccatcatcctggcgggc
cgtgacatgattggcgtggccaagacgggctctggcaagacgctggcgttcgtgctgcca
atgatgcggcacatagccgaccagccggagctgctggacacggacgggcctatcgccatc
atcatggcgccgacccgggagctgtgcctgcagatcggaaaggagtgtcgcaagttcgcc
cggccgctcggcatccgcgccgtctgcgtgtacggcggcaccggcatcagcgagcagatc
gccgaactgaagcgcggcgccgagatcatcgtgtgcacgcccgggcggatgatcgacatg
ctggcggccaactcgggccgcgtcaccaacctcgtccgcgtcacctacatcgtgctggac
gaggccgaccgcatgttcgacatgggcttcgagccgcaggtgatgcggatcatcgacaac
gtgcgcccagaccggcagtgtgtgctgtttagtgccacattcccgcggcagatggaagca
ctggcgcgccgcatccttcttaagcctgtcgaagtacaagttggcggcaagagtatcgtg
tgcaaggatgttgagcagcacatagtgatcctggacgaggcgcagaaattcttcaaactg
ctggagctgctgggcaccagcgcccagcaggagagcacgctcatcttcgtggacaagcag
gaggcggcagatgacctgctccgtgacctgatgaaggccatgtacccctgcatggccttg
cacggcggcattgaccaatttgaccgcgactccaccatcaatgacttcaagagcggcaag
gtcaacctgctgatcgccacctccgtggcggcgcgaggtctggatgtgaagcacctgacc
atggtgatcaactacgactgccccaaccactacgaggactacgtgcaccgatgcggccgc
accggcagggcgggcaaccacggcaaggcgtacaccttcctcacggaggacaacgccaag
caggctggcgacatcatcaaggctctggagctgtccgagtcgctggtgcccagcgacctt
aaacacctctgggaccagtacaaggagcagcagtcctcggagggcaagaaggtgcgcacc
ggcggcggcttcggcgggcgcggcttcaagttcgacgagaacgaggcgcagaacaccagc
gaccgcaagaagttcgagaaggcggcactgggcctgcaggactcggacgatgaggacgtc
agcgaggatatggacatgaagatcgagtcgatgctggcgccgaagcggatcgtcaaggag
gtgaagccgcagaacggcggcggcggcggaggcggcggtcaaggcggctcgggggcgagc
ggcacggccggcacgccgtcgggcctgcccggcctcatgacgacgcccgtgtttggcggc
gccgccggcgacaagttggagctggcgcgccggctcgcgctccgcatcaacgcccagagg
aacctcggtcccgacaaccgcggcgccagtcagcagacggccgaggccgtcatgtcgggc
cgcgggtcccagccgctcatcacggccaagatggtggcggagcagctggcggccaagctg
aacacgcggctcaactacatccccgaggagcgctcggaggaggagccggaacccgaggag
actttcaccaagtacgaggaggagctggagatcaacgacttcccgcagcacacgcgctgg
cgcgtcaccagcaaggaggcgttagcacagatctccgagtactcggaagccggcatcacg
gtgcgcggcacgtattacgcgcccaacgccaagattccggagggtgagcgcaaactattc
ctggccatcgagtcgacctcggagctggccgtcagcaaggccaaggccgagatcactcgt
cttatcaaggaagagctggtgcgcgcgcagacgtcgcaccactctggcggcaaccgcggg
aggtacaaggtgctgtga
DBGET
integrated database retrieval system
