Pollicipes pollicipes (gooseneck barnacle): 119111730
Help
Entry
119111730 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119111730
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119111730
BRITE hierarchy
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
DUF4290
Motif
Other DBs
NCBI-GeneID:
119111730
NCBI-ProteinID:
XP_037091429
EnsemblRapid:
LOC119111730
LinkDB
All DBs
Position
Unknown
AA seq
1961 aa
AA seq
DB search
MTNSNSHVNGASLEDCHTNFFALTDLCGIKWRSYRIEHELKSDPLEDPVILSFTKCLASD
ILSVWRRVQHAKSPPPPPPASLEPGAPPPPPTPAAPXPTVTTYKELWIFWYGDEPELSNV
IAPQLFNRKQDEGNWESGLSYECRSLLFKALHKFIERCLLSRGFVKLGKWFAQPCSNVDK
LQNKTYSANLSFAFSFFVHGESTVCASLSLRQHAPLRRVTRAHLSAAHGHGAGLPVLLAP
YGLAGVLTGQTYRLSAPHTRKLVDAWRQFYPIDNRLLASLQTGREPHLPVVVEVLVGDVK
MRYLTSYVLVTEPEGGGGAMRPLGVSTHLAIAADDELMSEAVSVRAWRQSTVASGPGRTG
ALTLGVSAAGDNSPESLGQWDFQDPIQKPTCACANCKKKVRQKQQYLKRQEKERPPRMKA
GVCHRRAALSEELAHTIDADLVSGVARLNGAPPPPPPQAYYKSQVATPGSVRPALTDGLP
SVGPMDSPASVGPSPLPTPHSQPCLVPPDHAMPTLSPHPPTPSAATPTASPLRAQLLRRP
QLPTIQLEADVDMVDSSNLYDFHDVNLWLSCPVKRPAELRTTFLRRIKDEVDRSERAMQE
GEAAQANGARPPNAAAVHPLARGVKRPADPYEFDDDPSASVHMDGLKSEADDAGGPKVKA
DSLFTTEGLQPKLADLENLFDDHSDADDSAAPTPPGSNKPNGAGEEPPRPHAKTALPAAT
AVLNSIELSKIYPTPPSHEHNHNPSASPVCHYEGAPADVEAAALVGFKAERMDDRPLPPP
ERTDMSYVFRPAALSSFVSSPKYAPLESLPSQQSSPVNLPMGAVYKPSWQYGQPTPLGKA
PLAGRPPPPGALPVPQPLPPGPIQSMNQMAQTGMLTHPPASTPRHGLSPFSPGHYDGGPA
SLKSCPGSVGAASMGPHSRAAADAAGLLTLQAPEVPALLINVLLEDSMLNLFHDHNFDSC
TMCVCNAGPNRVGNIRGKEAGLYIPDSTKADSEEPVSCKCGYSAVVNRALAYRSGLFLED
EVELTGERREVQYERTKPPLLAPLRPGERVEPDPLVDAVPPELLQLIQEQCLTSPSMVNI
VHRTAFKYLNAAATAAGAPAVSYLEYTDAVNVVRSAMEMFRTGSGPAPPEAKQRSVMHRW
PSLRAPGPLCNQDIVRVMRALQPHLQDAIQKKRQTKLWESTYLVSGPLTWRQFHRLAGRG
TDDHCTPQPIPTLLVGHEGEWVSTSPFSLRHWDQLLLEPVAAARHVAYLVVTPAGDNEFI
VSRVRNFFRELSSTYDSCQLGRHVPIGSSCPEGVLRINRNAATKLANLHVEDWFNHLGDS
QVAAKLKLYAQYCRHYVGPYLQTSMERGVERERPAPSPMPPPATPDAHDRAPATPKMSDD
DMHGTRLGVDGGGVNYGPTPGGGVAPGSGEMPQIVVYFIDPFTYGAQLSAFERFINVALL
RAYLHMRSTLPETMQKNITLQVISLESILSPWRDLDGAQQRERLRSLAFTVYSQCKRTFC
GASSANSLTGFGPTASAEQRLKGREDQGATLQMYNPTFMLAPLPDAQKESEVLTSPRDTT
STLFCSYCLSEDQRWLLAGCTDERGEMRQTIAINIHIPNRLRRRKISARRIGLQKLMDWL
LQIMVQSVHPWRLVVGRLGRIGHGELKSWSSVLSRKSLTRFSKQLREMCRHCQHLPASEM
PTILSACVVSLEPDACHRLMYDQCTPEDGVQKPSAGALSTPHDASCTHVMVFPTSATTQC
SQTAFQQEHINPLGSELIEEDLLQAINADEDGDLIGNGTLFDDLDLNWEDSFGGGDIGSP
TDERPTASPSGGLPGLGKQGPFSNGSGQRGGGDEEQEEFGTVLQQPLALGYFPSTASTGP
MPAWFWAAAPHMQHNTAVFLKSALHLHCQTQNSEDMLQQPCHVKVHPLDSSTTTDVLRHV
LENYNRLSWLALDPASQDRRSCLPIHMQLLVQLYAAMAAML
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgactaactctaattcgcacgtcaacggggcgagcttggaggattgtcatacgaatttc
ttcgctctgactgatttatgcggcatcaaatggcggagctataggatcgagcatgagctg
aagtccgatccactggaggatcctgtcatcctctcatttacaaaatgtctggcaagcgac
atcctgtcagtgtggcgacgcgtgcagcacgccaagtcgccgccgccgccgccgccggca
tcgctggagccgggcgcgccgccgccgccgccgacacccgccgcgcccnnccctaccgtc
accacctacaaggagctctggatcttctggtatggcgacgaaccggagctaagcaacgtc
attgctccgcagctcttcaacagaaaacaagacgagggcaactgggagagcggcctgtcg
tatgagtgccgctcgctcctcttcaaggctctccacaagttcatcgagagatgcctgctg
tcccgaggttttgtaaaactgggaaaatggttcgcgcagccatgctccaatgtggacaaa
ctccaaaacaaaacctacagcgccaacctgtcgttcgccttctcgttcttcgtgcacggc
gagagcacggtgtgcgccagcctgtcgctgcgccaacacgcgccgctgcggcgcgtgacg
cgcgcccacctctcggcggcgcacggccacggcgccggcctgccggtgctgctggcgccg
tacggcctggccggcgtgctcaccggccagacgtaccgcctgagcgcgccgcacacgcgc
aagctggtggacgcctggcgccagttctacccgatcgacaaccggctgctggccagcctg
cagacgggccgcgagccccacttgcccgtcgtcgtcgaggtgctggtcggtgacgtgaag
atgcgctacctgaccagctacgtgctggtgacggagccggagggcggcggcggcgccatg
cggccgctgggcgtgtcgacccacctagcgatcgccgccgacgacgagctgatgagcgag
gcggtgtcggtgcgcgcctggcgccagtcaacggtagccagcgggccgggccgcaccggc
gcgctcacgctgggcgtcagcgccgccggtgacaacagccccgagtcgctcggccagtgg
gacttccaggatccgatccagaagccgacgtgcgcctgcgccaactgcaagaagaaggtg
cgccagaagcagcagtacctgaagcggcaggagaaggagcggccaccgcgcatgaaggcc
ggcgtctgtcaccggcgcgccgcgctctccgaggagctggcgcacaccatcgacgccgac
ctggtgagcggcgtggcgcggctgaacggcgcgccgccgccgccgccgccgcaggcctac
tacaagtcgcaggtggcaacgccaggcagcgtgcggccggcgctgacggacggcctgccg
tcggtggggcccatggactcgccggcgtcggtcggcccgtcgccgctgccgacgccccac
tcgcagccgtgcctggtgccgcccgaccacgccatgccgacgctgtcgccgcacccgccc
acgcccagcgccgccacgcccacggccagcccgctgcgcgcacagctgctgcgccgcccg
cagctgcccaccatccagctggaggcagatgtcgacatggtggactcgtccaatctgtac
gacttccacgacgtcaacctctggctcagctgcccagtgaagcgcccggccgaactgcgc
accaccttcctgcgccgcatcaaggacgaggtggaccggtccgagcgcgccatgcaggag
ggcgaggccgctcaggccaacggcgcccggccgccgaacgcggcggcggtgcacccgctg
gcgcgcggcgtcaagcggccggctgacccgtacgagttcgacgacgatccgtcggccagc
gtgcacatggacggcctcaagtcggaggcggacgacgccggcgggcccaaggtgaaggcc
gacagcctcttcaccaccgagggcctgcagcccaagctggccgacctggagaacctgttc
gacgaccactcggacgccgacgactcggcggcgccgacgccgcccggctccaacaagccg
aacggcgccggcgaagagccgccgcggccgcacgccaagacggcgctgccggccgccacg
gccgtgctcaacagcatcgagctctccaagatctacccgacgccgccgtcgcacgagcac
aaccacaacccgagcgcgtcgccggtgtgccactacgagggcgcaccggccgacgtcgag
gccgcggcgctggtcggctttaaggcggagcgcatggacgaccggccgctaccgcccccc
gaacgcacggacatgtcgtacgtgttccggccggcggcgctgagcagcttcgtcagctcg
cccaagtacgcgccgctggagagcctgcccagccagcagtcgtcccccgtcaacctgccc
atgggcgccgtctacaagccctcctggcagtacggccagccgacgccgctcggcaaagcg
ccgctcgccggtcggccgccgccgcccggggcgctgcccgtgccgcagccgctgccgccc
ggccccatccagtcgatgaaccagatggcgcagacgggcatgctgacgcacccgccggca
tcgacgccgcgccacggcctgtcgcccttctcgccgggccactacgacggcggtccggcc
tcgctcaagtcgtgtcccggctcggtgggcgccgcctcgatgggaccgcactcgcgcgcc
gccgccgacgccgccggcctgctgacgctgcaggcgcccgaggtgccggcgctgctcatc
aacgtgctgctggaggactcgatgctcaacctgttccacgatcacaacttcgatagctgt
acaatgtgcgtgtgcaacgccggccccaaccgggtgggcaacattcgcggcaaggaggcc
ggactctatatcccggatagtacaaaggcggactcagaggagccggtcagctgcaagtgc
ggctacagcgcggtggtgaaccgggcgctggcctaccgcagcggcctcttcctcgaggac
gaggtggagctgacgggcgagcggcgcgaggtgcagtacgagcgcaccaagccgccgctg
ctggcgccgctgcggcccggcgagcgcgtcgagcccgacccgctggtggacgccgtgccg
cccgagctgctgcagctcatccaggagcagtgcctcacgtcacccagcatggtcaacatc
gtgcaccgcacggccttcaagtacctgaacgcggcggcgacggcggccggcgccccggcc
gtcagctacctggagtacacggacgcggtgaacgtggtgcgcagcgcgatggagatgttc
cgcaccggctccgggccggcgccgcccgaggccaagcagcgcagtgtcatgcaccggtgg
ccgtccctgcgcgcgcccggcccgctgtgcaatcaggacatcgtgcgcgtgatgcgcgcg
ctgcagccgcacctgcaggacgccatccagaagaagcggcagaccaagctgtgggagtcg
acgtacctggtgtcgggcccgctgacctggcggcagttccaccggctagccggccgaggc
acggacgaccactgcacgccgcagccgatcccgacgctgttggtgggccacgagggcgag
tgggtgtcgacgtcgccgttctcgctgcgccactgggaccagctgctgctggagccggtg
gcggccgcgcgccacgtggcctacctggtcgtcacgccggccggcgacaacgagttcatc
gtgtcgcgcgtgcgcaacttcttccgcgagctgagcagcacgtacgactcgtgccagctg
ggccgccatgtaccgatcggcagctcgtgcccggagggtgtgctgcgcatcaaccgcaac
gccgccaccaagctggccaacctgcacgtggaggactggttcaaccacctgggcgactcg
caggtggccgccaaactcaagctctacgcgcagtactgccggcactacgtgggcccgtac
ctgcagacgtccatggagcggggcgtggagcgcgagcggccggcgccctcgcccatgccg
ccgccggccaccccggacgcgcacgaccgcgctccggccacgcctaagatgagcgacgac
gacatgcacggcacgcggctgggcgtggacggaggcggcgtcaactacggcccgacgccg
ggcggcggcgtggcccccggcagcggcgagatgccgcagatcgtggtctacttcatcgac
ccgttcacgtacggcgcgcagctgtcggcgtttgagcgattcatcaacgtggcgctgctg
cgcgcctacctgcacatgcgctccacgctgcccgagaccatgcagaagaacatcacgctg
caggtgatctcgctggagagcatcctctcgccgtggcgcgacctggacggggcgcagcag
cgcgagcgactgcgctcgctcgccttcaccgtctactcgcagtgcaagcgcaccttctgc
ggcgccagctcggccaactcgctgactgggttcgggccgacggcgtccgctgagcagcgg
ctcaagggccgggaggaccagggcgccaccctgcagatgtacaacccgacgttcatgctg
gcgccgctgccggacgcgcagaaggagtcggaggtgctgacgtcgccgcgcgacaccacg
tcgacgctgttctgcagctactgcctgtcggaggaccagcgctggctgctggccggctgc
acggacgaacgcggcgagatgcgccagacgatcgccatcaacatccacatccccaaccgg
ctgcggcggcgcaagatctcggcccgccgcatcggcctgcagaagctgatggactggctg
ctgcagatcatggtgcagtcggtgcacccctggcgcctggtggtcggccggctcggccgc
atcggacacggcgagctcaagagctggagttctgtgctgagccgcaagtcgctgacgcgc
ttctcgaagcagctgcgcgagatgtgccgccactgccagcacctgccggcttccgagatg
ccgaccatcctgtcggcgtgcgtggtctcgctggagccggacgcctgccaccggctcatg
tacgaccagtgcacgccggaggacggcgtccagaagccgtcggcgggcgcgctgagcacg
ccgcacgacgcctcctgcacgcacgtcatggtcttccccacgtcggccacgacgcagtgc
tcgcagacggcgttccagcaggagcacatcaacccgctgggctcggagctgatcgaggag
gacctgctgcaggctatcaacgccgacgaggacggagacctgatcggcaacggcacgctg
ttcgacgacctcgacctcaactgggaggactcgttcggcggcggcgacatcggcagtccg
accgatgagcggccgacggcctcgcccagcggcggcctgccgggcctcggcaagcaggga
ccgttctccaacggcagcgggcagcggggcggtggcgacgaggagcaggaggagttcggc
acggtactgcagcagccgctggcgctcggctacttcccgtccacggccagcacggggccc
atgcccgcctggttctgggcggcggcgccgcacatgcagcacaacacggccgtcttcctc
aagtcggcgctgcacctgcactgccagacgcagaactcggaggacatgctgcagcagccg
tgccacgtcaaggtgcacccgctcgactcgagcaccaccaccgacgttctcaggcacgtg
ctggagaactacaaccggctgtcgtggctggcgctggacccggcttcgcaggaccgccgc
tcctgcctgcccatccacatgcagctgctggtgcagctgtacgccgccatggccgccatg
ctgtag
DBGET
integrated database retrieval system
