Pectobacterium polonicum: LW347_07200
Help
Entry
LW347_07200 CDS
T08488
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00521
Streptomycin biosynthesis
ppoo00523
Polyketide sugar unit biosynthesis
ppoo00541
O-Antigen nucleotide sugar biosynthesis
ppoo01100
Metabolic pathways
ppoo01110
Biosynthesis of secondary metabolites
ppoo01250
Biosynthesis of nucleotide sugars
Module
ppoo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LW347_07200 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LW347_07200 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LW347_07200 (rfbC)
Enzymes [BR:
ppoo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LW347_07200 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF4738
Motif
Other DBs
NCBI-ProteinID:
UVO09730
LinkDB
All DBs
Position
complement(1604979..1605515)
Genome browser
AA seq
178 aa
AA seq
DB search
MQIIDTAVYGAKIIQPKIFGDARGFFLETFEKKRYQKMLDIDLDFVQDNHSRSSKGVLRG
LHFQKTKPQGKLVHVVRGEVFDVVVDIRPNSPTYGVWEGIILSEENKTQFWLPPGLAHGF
VVLSEFADFEYKCTDYYDPSDEGCLLWNDPEVGIEWPVSAPMLSEKDKLGRLFKDLAK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcattgataccgctgtttacggcgcaaaaattattcaaccgaaaatatttggt
gacgccagaggcttcttccttgaaacatttgagaagaagcgctaccaaaagatgttggat
atcgatttagactttgttcaggataaccattcccgttcaagcaaaggcgtattacgcggt
ctgcatttccagaaaactaaaccacaagggaagctggtgcacgtggttcgtggagaggta
tttgatgtggtcgtggatattcgcccaaattccccaacatatggtgtatgggaaggcatt
atcctttcagaagaaaacaaaacacaattttggttacctccggggctagctcatggtttt
gttgtcctttcggaattcgcagatttcgaatataaatgtacggattattatgatcccagc
gatgaaggctgcctgctatggaacgatcctgaagttggcattgaatggccagtgtctgcc
ccgatgttatctgagaaagataagttagggagacttttcaaggacctggcaaaatga
DBGET
integrated database retrieval system