Pectobacterium polonicum: LW347_07690
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Entry
LW347_07690 CDS
T08488
Name
(GenBank) ABC transporter permease subunit
KO
K02033
peptide/nickel transport system permease protein
K02034
peptide/nickel transport system permease protein
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LW347_07690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_07690
Transporters [BR:
ppoo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LW347_07690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
UVO09822
LinkDB
All DBs
Position
complement(1728138..1729916)
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AA seq
592 aa
AA seq
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MSESLYCRTCANINQTQRPRYGVLIPLFSRLLTLAGIVALIGMLPWLSGQDPALALLRAR
SGEQEATAETLNAIRQSLGLDQGPLQLLLNWLTGLLHGDAGNSWVSGQPVLPGMLQSAGV
SLTLMASSALVAFTLAAVLCVPTFRQGLRGHIHRSGGLFAAFFTALPEFLLASLLLIVGA
VWLQWFPPNGWLGVHYAVLPSLALGIPAGGYLGRIIADALSATFSENWLTTWSVAGVSRR
HIALAVLKRTLPSVMPLVGLVLVSLTGGAIAVEKVFAIPGLGRATLGAAAAQDLPALQVG
VLILLLIASLAGMAAGGVRLLILGRALRSGAMPVPEERASFVSRHAIWLPIVCVMLLALL
LLAGLPRDPVTSAFLRLQPPSFALPFGADAMGRDLLARVAHGTLNTCLLALAVSLACLAI
GLLVGLFPRLFTGPIEVTNALPPVIAGLLVAAVNGPTATGAAIAVIAVSWAPLAAHTAAL
VAEINARPYIRMLPMLGVGPIRRSLFYILPALAGPLFRHAMLRLPGIALALASLGFLGLG
ASPPTPEWGRVLAEGMPYIERAFWGVLAPAAALGVLSILAVSAANLSGGHKH
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatcgctgtactgccgcacctgtgccaacattaatcagacgcaacgcccacgc
tatggcgtgctgatcccgttattttcgcggctgctaacgctggcaggcattgtggcgctg
attggtatgctgccgtggctatccggccaagacccggcgctggcattgctgcgcgcccgc
tcgggtgaacaggaagcaacggcggaaacgctaaacgcgattcgtcagtcgctcgggctg
gatcaaggcccgttgcagttgctgttgaactggctaactggcctgttgcacggcgatgca
ggtaattcctgggtttccggtcaacctgtgctcccaggaatgttgcagtcggctggcgtc
tcgctcacgctgatggcctcttcagcgctggtggctttcacattggctgccgtgctgtgc
gtcccaacgtttcggcaggggcttcgtggtcatattcaccgttcaggcggtctgtttgcc
gccttctttaccgcactgcccgagttcctgctggcatcgcttttgctgatcgtcggtgcc
gtctggctacagtggtttccacccaatggctggctgggggtgcattacgcagtgctgccg
tcgctggcactcggtattccggcaggcggttaccttggccggattattgccgatgcgctc
tccgccacctttagcgaaaattggttaacgacctggagcgtcgccggggtgagccgccgt
catatcgcgctggcggtactgaaacgcacgctgcccagcgtgatgccgctggtaggattg
gtactggtatcgctaacgggcggtgcgattgccgtcgaaaaagtgtttgcgattcccggt
ctgggacgcgcaacgctgggggccgctgccgcgcaggatctgcccgcattgcaggtcggc
gtgctgatattactccttatcgcctcgctagctggcatggcggctggcggtgtgcggctg
ctgatcctcggacgcgcactgcgcagcggagcaatgccagtgccggaagaacgcgctagt
ttcgtgtctcgtcatgccatctggctaccgattgtctgcgtaatgctgctggcacttctg
ctactcgcgggtctgccgcgcgatcccgttacctccgcctttttacgcctgcaaccgcct
tcattcgcgctgccctttggcgcagacgctatggggcgtgatttactcgcacgcgttgca
cacggcacgctgaatacctgtctgttagcactggcggtgtcgctggcctgtctcgcaatt
ggcctattggtcgggctgttcccgcgtctgttcaccggccccatcgaagtgactaacgcc
ctgccgcccgtgatcgccgggctgctggttgccgccgtcaatggcccaacggccacaggt
gcggcgattgcagtcatcgccgtcagttgggctccactcgctgcccacacagcagcgctg
gtcgctgaaattaatgcgcgcccttatattcggatgttgccgatgctcggcgtgggcccg
atacgacgtagtctgttctatattctgcccgcgctggctggtccgctttttcgtcacgcc
atgctgcggctacccggcatcgcgctggcgctggcatcactcggctttttaggtctgggc
gcgtcaccgccgacgccggagtgggggcgcgtattggcggaaggtatgccgtatattgaa
cgtgccttctggggcgtactggcaccggctgccgcactcggcgtgctgtcgatactggcc
gtgagcgcagcgaatctctctggtggccacaagcactaa
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