Pectobacterium polonicum: LW347_12160
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Entry
LW347_12160 CDS
T08488
Symbol
uca
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00220
Arginine biosynthesis
ppoo00791
Atrazine degradation
ppoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
LW347_12160 (uca)
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
LW347_12160 (uca)
Enzymes [BR:
ppoo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
LW347_12160 (uca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
ATP-grasp_5
ATP-grasp_3
GCV_H
Motif
Other DBs
NCBI-ProteinID:
UVO06686
LinkDB
All DBs
Position
complement(2720577..2724182)
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AA seq
1201 aa
AA seq
DB search
MFDKLLIANRGAIACRILRSLREMNVRGVAVYSDADISSLHIQDADEALSLGEGAAAHTY
LDVEKILSAAQRSGAQAIHPGYGFLSENAAFAEACEAAQIAFVGPTPQQLRVFGLKHTAR
ALAKQHNVPLLEGTELLENIDAALRAAEAIGYPVMLKSTAGGGGIGMRVCYSTTELSDAF
ETVKRLGQNNFSDAGVFIEKYIERARHLEVQIFGNGQGDVLALGVRDCSVQRRNQKVIEE
TPAPNLPDGVADALCATAISLAQAVNYRSAGTVEFVYDSATDRFYFLEVNTRLQVEHGVT
EQVWGVDLVRWMIELAAGDLPPLHELAAGLNPQGHAIQARLYAEDPGKQFQPSPGLLTEV
VFPESEGQSLRIDTWVTAGCEIPPFFDPMRAKIIACAPTREQAIVGLDRARADTRLYGVE
HNRDYLRQILAAEPFASGQPWTRCLDILTYKATTCEVIGAGTQTTVQDYPGRLGYWAVGV
PPSGPMDDRALRLGNRLVGNLAGMAALEITMNGPILRFNTDAVAAVTGAAMAIELDGQPV
PMDSVFAIPAGTTLRLGAANAQGVRSYLCLRGGIDVPDYLGSKSTFTLGQFGGHAGRALR
AGDVLHLTPLTDRRTGDCLPDALCTTLPAVRELRVIYGPHAAPDYFTPAYMDTFLTTEWE
VHFNSSRTGVRLIGPKPEWVRDSGGEAGLHPSNIHDNPYAIGAVDFTGDMPVILGPDGPS
LGGFVCPVTIIEADLWALGQLTAGDRVRFIPVDLPTARALAQARHAEVEQLASIAVDWSP
AALISPVVLDSGEADRRLVARLSGDTHLLLEIGAAELDVALRFRVHALMLALEQQTLDGI
IDVTPGIRSLQVHYRPEVLSLPHLLNVLSTLWQDVCTQQNLTVPSRVVYLPLSWDDPACQ
LAIQKYMTTVRSDAPWCPSNLEFIRRINELDNLDEVYRTVFDASYLVMGLGDVYLGAPVA
TPLDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFVGRTLQMWDRYRGV
GAFDGKPWLLRFFDQIRFYPVSADELLSIRRDFPLGRYPLRIEQSELALNAYQDFLSREA
EEIEAFRVRQRAAFEAERERWRIAGQSVADSVDVVIEEASEAPILPGQVGVESPISGNLW
QVTTEVGKTVAEGETLMILESMKMEIPIVSPQRGTVREIRCQPGASVRAGQCVVVIEAQT
E
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaacttctgattgccaaccgtggcgcgattgcgtgccgcattctgcgttcg
ctgcgtgagatgaacgtccgtggcgtcgcggtttattctgatgccgatatcagtagcctg
catattcaggacgccgatgaagcccttagcctgggagagggcgcggcggctcacacctat
ctggatgtagaaaaaattctctctgcggcgcagcgcagcggcgcacaggcgattcatccc
ggctatggttttctgtccgagaatgcggcgtttgccgaagcctgcgaagcggcacagatt
gcctttgtcgggccgacgccccagcagctacgggtattcggcttaaaacatacggcgcgc
gcgttggcgaagcagcacaacgtaccgctgctggaaggcaccgagctgctggaaaatatt
gatgcggcccttcgggcggcggaagcgatcggctatccggtcatgcttaaaagcacagcg
ggtggcggtggaatcgggatgcgcgtctgctatagcaccacagaactgtctgacgcgttt
gaaacggtaaagcgtttgggacagaacaacttcagcgacgcaggcgttttcatcgaaaag
tatatcgaacgcgctcggcatctggaggtacagatttttggtaacgggcagggcgacgtg
ttggcgctgggggttcgggactgttcggtacagcgccgtaaccagaaagtgattgaagaa
acgcccgcgccgaatctgccagatggcgttgccgatgcgctgtgtgctacggcaatcagt
ctggcacaggcggtgaattaccgcagtgccggaacggtggaattcgtgtatgacagcgcg
acggaccgtttttactttcttgaagtcaatacgcgcctacaggtcgagcacggcgtaacg
gaacaggtctggggtgtggatctggtgcgctggatgatcgaactggccgcaggcgatctg
ccaccgctgcatgagttggcagccggactgaaccctcagggtcatgcgattcaggcgcgc
ctgtatgctgaagatccgggcaagcagttccagccgtcaccgggattactgacggaagtc
gtgtttcccgagtcagaaggacagagcctgcgcatcgatacgtgggtgacggccgggtgc
gagatccccccatttttcgacccgatgcgggctaagatcatcgcctgcgcgcccacccgc
gagcaggcgatagtcggattagatcgggcgcgggcggacacgcgactctacggcgttgaa
cacaaccgtgactatttgcgtcagattttggcggcagaaccgtttgccagcggtcagcca
tggacgcgctgtctggatatattgacctacaaggcgacaacttgtgaggtgatcggtgcg
ggtacgcagaccacggtacaggattaccccggacgccttggttattgggctgttggtgtg
ccaccgtcgggcccaatggacgatcgcgcgctgcgcttaggtaaccgtctggtggggaat
ctggcgggaatggctgcgttggagatcaccatgaacgggccgatactgcgttttaatacg
gacgccgtggcggcagtcaccggtgcggctatggctatcgaactggacggtcaacctgtg
ccgatggatagcgtctttgcgataccagcgggtactacgctgcggttaggtgcggcgaat
gcgcagggagtacgcagctatctttgcctgcgtggtggtatcgatgtaccggattatctc
ggcagtaaaagcaccttcacgctggggcaatttggcggccacgcgggcagggcgctgcgg
gcgggggacgtcttgcaccttacgccgctgacggacagacgcaccggtgattgcctgccg
gacgcattgtgcaccaccttacctgcggtgcgtgaactgcgcgtgatttatggtccacat
gcggcaccggactattttacgcctgcctatatggacacgtttctcactaccgagtgggaa
gtgcattttaactctagccgcacgggcgtgcgcctgattgggccgaaaccggagtgggta
cgcgatagcggtggagaagcggggctgcacccttcgaacattcacgacaacccgtatgct
attggtgcggtggatttcaccggcgatatgccggttattctggggccggacggcccgagt
ctcggtggattcgtctgtccggtaacgataatcgaagctgacctgtgggcgctggggcag
cttacagcgggcgaccgtgtgcgctttattcctgtcgatctcccgacggcgcgcgcactg
gcgcaagcacgccatgcggaggtggaacagcttgcctcgatcgctgtggactggtcgcct
gctgcgctcatttctccggtggtgttggatagcggtgaggcggatagacggctggttgca
cggctatccggtgatacccatttgctgctggaaataggcgcggcggagctggatgtcgcg
ctacgttttcgcgtccatgcgttgatgctggcgctggagcaacaaacgctcgacggtatc
attgacgtgacgccgggcattcgctcgttgcaggtgcactatcgtcctgaagtgctttcg
ttaccgcatttgttgaatgtgctttccacgctatggcaggacgtttgcacccagcagaat
ctgacggtgccctcacgagtggtttatctgccgctgtcctgggacgatcctgcctgccag
ttagcgattcaaaaatacatgaccacggtacgcagcgatgcgccctggtgcccgagcaac
cttgagtttatccgccgtattaacgaactggataatcttgatgaggtgtatcgcacggtg
tttgacgccagttacctggtgatggggctgggggacgtttacctcggtgcgcccgttgcg
actccgctagacccacgccaccgtttagtcaccaccaaatataatcctgcgcgtacctgg
acggcggaaaactcagtgggcatcggcggcgcgtacctgtgcgtttacggcatggaaggg
ccgggcggttaccaatttgtcggacgcacgctgcaaatgtgggatcgctatcgcggcgtt
ggcgcatttgacggcaaaccatggctactgcgcttctttgaccaaattcgcttctatccg
gtatcggctgacgaattgttatccattcgacgggatttcccgctagggcgctacccacta
cggatcgagcaaagtgaactggcgttaaacgcctatcaggatttcctgtcgcgggaagcg
gaagagattgaagcattccgcgtgcgtcagcgggcggcgtttgaggcagagcgcgagcgc
tggcgtattgccggtcaatcggtggcggatagcgtggacgtggtgattgaagaggcgagc
gaagcaccgatcctgccaggacaggtcggcgtagaaagcccgatttccggcaatctctgg
caggtgacgacggaagtcggcaaaacggtggcagagggagaaacgctgatgattctcgaa
tccatgaaaatggaaatcccgattgtgtcgccgcagcgcggtacggtgcgggagattcgc
tgccagcctggcgcatccgttcgcgctgggcagtgcgtggtggtgatcgaggcgcagacg
gaatag
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integrated database retrieval system
