Pectobacterium polonicum: LW347_19065
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Entry
LW347_19065 CDS
T08488
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00730
Thiamine metabolism
ppoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LW347_19065 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoo03009
]
LW347_19065 (rsgA)
Enzymes [BR:
ppoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
LW347_19065 (rsgA)
Ribosome biogenesis [BR:
ppoo03009
]
Prokaryotic type
GTPases
LW347_19065 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
FeoB_N
GTP_EFTU
AAA_16
AAA_29
cobW
ABC_tran
IIGP
nSTAND1
MMR_HSR1_Xtn
AAA_22
Arf
SMC_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UVO07917
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All DBs
Position
4232076..4233125
Genome browser
AA seq
349 aa
AA seq
DB search
MSKKKLSKGQQRRVSANHQRRLKKTESKVEWEDSQLGDAQEGIIISRFGMHADVEATDGV
VHRCNIRRTISSLVTGDRVVWRPGHESLAGISGIVEAVHPRHSVLTRPDYYDGIKPIAAN
IDQIVIVSAILPELSLNIIDRYLVACETLEIEPLIVLNKIDLLDDKSRQFVDEQMDIYRA
LKYRVLMVSSHTQQGIPELEHALTDRISIFAGQSGVGKSSLLNALLALGEERILVNEVSD
NSGLGQHTTTASRLYHFPHGGDVIDSPGVREFGLWHLEPEQVTRGFIELREYIGSCKFRD
CKHENDPGCAINAARERGDIATERFDNYHRILESMAQVKTRKGFSDTDN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaaagaaactgtcgaaaggtcagcagcgtcgggttagcgcaaaccaccagcgt
cgcctgaaaaaaacggaaagcaaagtcgaatgggaagatagccaactgggcgatgcgcag
gaaggtattatcattagccgattcggtatgcacgccgatgtggaagccaccgatggcgtg
gtgcaccgctgcaacattcgtcggaccatttcatcgctggtcacgggcgaccgggtcgtc
tggcgtcctggtcatgaatcgctcgcgggcatcagcgggatcgtggaagccgttcacccc
cgtcattcggttcttacgcgccctgactattatgatggcattaaaccgatcgccgccaat
atcgatcagatcgtgatcgtttcagcgatcttgcccgaactgtcgctgaatattatcgat
cgctatctggtcgcctgcgaaacgctggagatcgaaccgctgatcgtgctgaacaaaatt
gacctgctggatgataaatcccgtcaatttgtcgatgaacagatggatatttaccgtgcg
ctcaagtaccgcgtgttgatggtttccagccatacccaacagggtattcctgaactggag
cacgcgctaaccgaccgcatcagcattttcgctgggcaatcaggcgtcgggaaatccagc
ctgcttaacgcgctgcttgcgttgggtgaagaacgcattctggtaaatgaggtttccgat
aactcaggattggggcaacacaccaccaccgcctcccgactttaccacttcccgcatggt
ggcgacgtcatcgactcaccgggcgtgcgtgaatttggtttgtggcatctggagcccgaa
caggttacgcgtggtttcattgagctacgtgaatacatcggctcgtgcaagttccgcgat
tgtaaacatgaaaacgatccgggctgcgccattaacgccgcacgtgagcgcggagatatt
gctacagagcgctttgataactatcaccggattctcgaaagcatggcgcaagtaaaaacg
cgtaaaggcttttcggatacagataactga
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