Pseudodesulfovibrio portus: JCM14722_30890
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Entry
JCM14722_30890 CDS
T08636
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor00521
Streptomycin biosynthesis
ppor00523
Polyketide sugar unit biosynthesis
ppor00541
O-Antigen nucleotide sugar biosynthesis
ppor01100
Metabolic pathways
ppor01110
Biosynthesis of secondary metabolites
ppor01250
Biosynthesis of nucleotide sugars
Module
ppor_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JCM14722_30890 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JCM14722_30890 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JCM14722_30890 (rfbC)
Enzymes [BR:
ppor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JCM14722_30890 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BDQ35547
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All DBs
Position
3292579..3293148
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AA seq
189 aa
AA seq
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MQVHETGFSGLLVLEPRVFQDERGFFLESYSREAFGKLGIDCEFVQDNHAYSRDVGVLRG
FHFQAPPAAQAKLVWVTRGAVLDVVVDLRKGSPTFGKWRHVILSAANFKRMFIPHGFGHA
YVTIMPDTEFQYKVDAPYAPETEGGIVWDDPDIAMEWAVALRGREPVMSEKDKRLPRLAD
FDSPFIYED
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcacgaaacgggtttttccggccttctcgtcctggagccgagggtgttccag
gatgagcggggttttttcctggagagctacagcagggaagcgttcgggaagctcggcatc
gactgcgagtttgttcaggacaaccacgcttactcaagggatgtcggcgtgttgcgcggt
tttcacttccaggcgccccctgcggcacaggccaaactggtttgggtgacccgcggcgcg
gtcctggacgtggtcgtggacctgcgaaagggttcgccgaccttcggcaagtggcggcac
gtcatcctgagcgccgccaacttcaagcggatgttcatcccgcacggcttcggccatgcg
tatgtgaccatcatgcccgacaccgaattccagtataaggtcgacgcgccgtacgccccc
gagaccgagggcggcatcgtctgggacgatcccgacatcgccatggagtgggcggttgcc
ctgcgggggcgcgagcccgtcatgtccgaaaaggacaagcggctcccgaggctggccgat
ttcgactctcctttcatttatgaggattaa
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