Papilio polytes (common Mormon): 106099293
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Entry
106099293 CDS
T07437
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106099293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppot03400
]
106099293
Enzymes [BR:
ppot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
106099293
DNA repair and recombination proteins [BR:
ppot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106099293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT
DNA_ligase_A_C
DNA_ligase_IV
BRCT_2
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
106099293
NCBI-ProteinID:
XP_013133250
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MSSNVMKVPAEEVLFEDVCTMLDSIAKAKKKYEKITILTNYVDDFRLKVAQITEPKDPSF
YPILRLLLPGLEKERSYNLREKRLGSKLVQALAWDEKSSGSQKLLNYRANNRNQKDFATV
VCEELRYTVSEKSILTVGNINEILHKIANVENGKPPTLEHVLTSVLKRINVKQLKWFLRI
ILKEMKLNMGHSRIFEAYDSEAEYIYDNCNDLKKVCESIEKGNTRPSQMGVEIFHSISPM
LLSPLPITKLHALSFTDTYITEEKYDGERFQIHMENHIYKYFTRRGYERHNFGKTYDSGM
LTPLLKNCFAPNVKSFVLDGEMMGWNEEDEEFGSKGMNFDVKALKDHSEFKPSFCAFDIL
YYNGVSLVGPAEKGGLPLIKRLEILDELFTDIPQVLFHSKRETVQDNSDIVAAFNKSVAE
EKEGITIKNTQSYYLANRRNGGWYKTKGEYNKSTIQDLDLVIIGKRAGRYYVACVDNSGD
SAQWLCMCGVGNLGAAVRGALNARLQPHWRRRADHPAPPHLHFNKQYIDHWIPPEKSVVL
QVRASELVKCENYGTPYTLRFQRVVKVRYDKPVHDILTLREFEEIVSSDSKVVKLSKTIS
EDSIDSLANIPHKRRVKKPLQVAEQFRQQRAADLLVKSKALLGRKVCILSDDYDCSKSEL
IKILEAHGGVHTEHYGAETWCCVAGTLTYYVKNLIELKSKDESALDIVSSAWLRNLPDSD
ELCSLSPLEFLSIKKETRLKMGVYFDRFGDSYTELLNVETLRKCFEKMDSDKPPIYLTTQ
EKINVDKVLFDNNNPYSYLRCCFLAIPNSDSLYTIRAKMYGANLCDMDCVNVTHVVLPKM
ASNEDKMAAKTSEAFVVSEEWLDTCFNEGRHVQEKSFLFFY
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaatgtaatgaaagtaccggctgaggaagtattatttgaagatgtgtgcacc
atgctagacagtatagctaaagccaagaagaaatacgagaaaattacaattttgacaaat
tatgttgacgactttaggttaaaagtggctcaaatcactgaaccaaaggatccaagtttc
taccctatattaagattgctgctgcctggattagaaaaagagcgaagttacaacttgaga
gagaagagacttggcagcaaattagtacaggccctcgcttgggatgaaaagtcatcaggt
tctcaaaagttattgaattaccgagcgaataatagaaatcaaaaggattttgctacagtt
gtatgtgaagaattaagatatacggtgtcggaaaaatcaatattaactgtaggaaatatt
aacgaaattcttcataagatcgctaatgtggagaatgggaagccacctacactcgaacac
gtgttaacttcagtgttaaagagaataaatgtgaaacaattgaaatggtttctgcggatt
attctaaaggagatgaaactaaacatgggccattcgcgtatattcgaagcgtacgattca
gaagccgagtatatttacgataattgcaatgatttgaaaaaggtttgtgaaagcatcgag
aaagggaatacacggccgtcacagatgggtgtagaaattttccattcaataagtccaatg
cttttgagccctttacctataactaaactacatgctctgtcattcacggacacttatata
actgaagagaaatatgacggagaaagatttcagatccacatggaaaatcatatatataag
tattttacaagaaggggctatgagagacataattttggcaaaacctatgattcaggaatg
ttgacgccattgcttaaaaattgtttcgcgcctaatgtaaaaagtttcgtattagacggt
gagatgatgggatggaacgaagaagacgaagagttcggatcaaaaggcatgaattttgac
gtgaaagccttgaaggatcattcggaattcaaaccgagcttctgcgctttcgatatactt
tattacaatggagtctcattggttggtccggcggaaaagggcggtttaccgctcattaaa
cgtctcgaaattctcgacgaactattcacagacattccgcaagttttattccatagtaag
agagagactgtccaagacaattcagatatagttgccgcttttaataaatctgtggctgaa
gaaaaagaaggtatcaccatcaagaacacgcagtcgtactacctcgctaaccgacgtaac
ggcggctggtacaagacaaagggcgaatataataaaagcacaatacaagatctcgatttg
gtaataattggcaaacgtgcaggacgatattacgttgcttgcgtagacaattcaggcgat
agtgcacagtggctgtgtatgtgcggcgtgggtaacttaggcgcggcggtgcgcggggcc
ctcaacgcgcgcttgcagccgcactggcgccgccgcgctgatcaccccgcgcccccacat
ctacacttcaataagcagtacatcgatcattggataccaccggaaaaatctgtcgtctta
caggtgcgagcttcggagttagtgaaatgcgagaattacggcacgccgtacacgttgcgt
ttccaacgcgtagtcaaagtccgctatgacaagcctgtgcacgatatactgaccttgaga
gagtttgaagaaatagtgtcgtctgactcgaaagttgtgaagctcagtaaaactattagc
gaagatagtatcgacagtttagccaacattcctcacaagaggcgtgtgaagaagcctctg
caggtggccgagcagttcaggcagcagcgcgccgccgacctgctcgtcaaatccaaagca
ctcctcggcaggaaggtctgcatactctcggatgactatgattgcagcaaatcagaactt
atcaaaatattggaggcgcacggcggcgtacatacagaacactatggtgcagaaacgtgg
tgttgtgtggcgggtacactcacatattatgtcaaaaatcttatagaattgaaatctaaa
gacgaatcagcgctagatatagtcagttccgcctggctgaggaatctacctgactcagat
gaactctgctctttgtcgcccttggaatttttgtcaataaaaaaggaaactaggctcaaa
atgggagtatatttcgatagattcggtgatagctacactgagttactgaatgttgagaca
ttgagaaaatgcttcgagaaaatggacagtgataaaccacccatatacctaacaacgcaa
gagaaaataaatgtagacaaagttctatttgataataataatccatattcttatttgcgt
tgttgttttcttgcaattccaaatagcgatagtctttacactatacgagctaaaatgtat
ggagctaatttatgtgatatggattgtgtcaatgttacacacgtcgttttacccaaaatg
gcgtcgaacgaagacaagatggcggcgaaaactagcgaagcttttgtagtgagtgaagaa
tggttagacacgtgttttaacgaaggaagacacgtgcaagaaaaatcgtttttatttttt
tattaa
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