Papilio polytes (common Mormon): 106102444
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Entry
106102444 CDS
T07437
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03022
Basal transcription factors
ppot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106102444
09124 Replication and repair
03420 Nucleotide excision repair
106102444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppot03021
]
106102444
03400 DNA repair and recombination proteins [BR:
ppot03400
]
106102444
Transcription machinery [BR:
ppot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106102444
DNA repair and recombination proteins [BR:
ppot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106102444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
106102444
NCBI-ProteinID:
XP_013137381
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSESSKSKSLNLNPSPTLQCKNLHEYLQSRTPQFLETLYNYPTICLAVYRELPELARHFV
IRLLFVEQPVPQAVVASWVSQTHAKEQSKACEALSELSVWQEAPIPGGLPGWILAQSFKK
NLKAALLGGGRPWSMSSSLEPDSKARDVAFLDSYALERWECVLHYMVGSTQTEGISADAV
RILLHAGLMTRDAEDGSAVITRAGFQFLLLSTAKQVWLFLQHYLHTAEKRSLSAAECLAF
LYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNITCVREG
SAPPAAPPAPPAPGARGAAGAGGAAGARGYIVVETNYRVYAYTQTSLQVALLGLFTELLY
RFPNLVVGVVTRESVRQALRGGITADQIIRYLQQHAHPQMLQAHSAHSPLPTLLPPTVVD
QVRLWQAERNRFSYTEGVVYNQFLSQADFALVREYARAQSVLVWHSERTRTVIVTRAGHD
AVRKYWKKHSKTA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcatctaaatctaagtccttaaatctgaatccctcaccgacgttgcaatgt
aaaaatctccatgaatatctgcagagcaggacaccacagtttctggaaactttatataac
tatcctacgatatgcctagctgtgtaccgggaactaccagaattggctcggcattttgta
attcgcttactatttgtggaacagccagttccacaagctgtggttgcatcatgggtctca
cagacacatgctaaagaacaaagtaaagcatgtgaggcattatcagagctgtcggtgtgg
caggaggcacctataccaggaggtttgcccgggtggatactagctcagtctttcaaaaag
aacctaaaggctgctttgttaggaggtggtcggccatggagcatgtcatcatcactggaa
cctgacagcaaggcgcgggatgtggctttcctagactcatatgcgctggagcggtgggag
tgtgtgctgcactacatggtgggcagcacacagactgaaggcatcagtgctgatgctgtc
aggatactgctgcacgctggattgatgaccagagatgcagaagatggttctgctgttatc
accagagctggttttcagttcctgctgctgagcaccgccaaacaggtgtggctgttcctg
cagcactacctgcacacggcggagaagcgcagcctcagcgccgcggagtgcctcgccttc
ctctaccagctcagcttcagcaccctcggcaaggactacagcacggagggcatgagcaac
aacatgctggtgttcctgcagcacctgcgcgagttcggcctcgtctaccagaggaagcgt
aaagcgggccgcttctacccgacgcggctggcgctgaacatcacgtgcgtgcgcgagggc
tccgcgccgcccgccgcgccccctgcgccccctgcgccgggtgcgcggggcgcggcgggc
gcggggggcgcggcgggcgcgcgcggctacatcgtggtggagacgaactaccgcgtgtac
gcgtacacgcagaccagcctgcaggtggcgctgctcggcctcttcacggagctgctctac
aggttcccgaacctggtggtgggcgtggtgacgcgcgagtcggtgcggcaggcgctgcgc
ggcggcatcaccgcagaccagatcatacgctacctgcagcagcacgcgcacccccagatg
ctgcaggcgcactccgcccactctcccctcccaacgctgctgccgcccaccgtcgtggac
caggtgcgcctctggcaggcggagaggaaccgcttctcctacaccgagggcgtcgtctac
aaccagttcctctcgcaggcggacttcgcgctggtgcgggagtacgcgcgcgcgcagagc
gtgctcgtgtggcacagcgagcgcacgcgcaccgtcatcgtcacccgcgccggccacgac
gccgtgcgcaagtactggaagaagcactccaagaccgcctag
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