Papilio polytes (common Mormon): 106108273
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Entry
106108273 CDS
T07437
Name
(RefSeq) uncharacterized protein LOC106108273 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106108273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppot03021
]
106108273
03019 Messenger RNA biogenesis [BR:
ppot03019
]
106108273
Transcription machinery [BR:
ppot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106108273
Messenger RNA biogenesis [BR:
ppot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106108273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_helical
zf_UBZ
CFIA_Pcf11
Motif
Other DBs
NCBI-GeneID:
106108273
NCBI-ProteinID:
XP_013144838
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MAKEIAEEYASSLADLTVNSKPLINMLTILAEENIDHAGVIVDTVEKHLEKVHPEIKLPV
LYLVDSIIKNVGGAYTQKFSQSIVNMFTRTFKQVDEKIRSQMFKLRETWHDVFPATKLYQ
LDVKVNLIDPAWPIQAQPQQSNIHVNPNFLKKNSAAAPTTSAAATLTEDEDKMHSILAKK
EQELLMLKRKKIEMELEKTRRQLELAEKNAKMGVGSGVSAMPVAVVNPAPAPAPAPAPAP
PISVKQRLGPPVNKPAAGRIAPVSGALVSARRDPRLARRPQPAPAVPPLPHVPHVPPVSA
VSTVPHVPRANNGPPIAPNVFDIKPLDRVTKRKNVITIDVRLDPSKDPRRRDPRLAERAR
DRRHKKNDDERERKRDELRQEKDKARDNAFNVRTAVDDYIDRLQISDPKKINKLPPIPKI
NRDENKDDDEPAPTKKRKENPKERRKKKEQNSSKESSSSSSPEKRLKSKEMRKKPKTKLE
VEEVHPVVTEPVTFKVLKNFNKDHYMCRNKKKSESPEREPEKTEVVKPNSEPNVLDVVME
TKDVDLRVLQPVLEAGAAAVAQKRPSTETVEGKPKKNKHDKFDILFGNEDVDLRQLPQVD
EVVPPPPPTITESLKVEVSLEDVKDECPVSTSSPKQKNWHEVKEKKDDTKKTPSKLDLVR
AKLAEATKGKDRLGRPLLFSKSPSIERERRRTLSSDDGDQKSDSGDDFTPEHNKKTISII
MSQAKEQFSDGKLNKDQYNTLMYQVLQLNEKLKLKEAKQRESLELSKRKLKAHIDEENHK
VVSPKSSPSDMNNFGDIDERVAPTPYFDTPPESQNFMQDSDMRKKQMGPDSPDGKNQALL
PLPPMMPMYMAPFPMWRGQARPRMDDFGPRRFRGPMPSFYRGKFDKRGPPRLPFDPRLPL
PLPTPKLGMCQGESPLLPYERTASPPPIGTPGHTIPPTNKKILDYIDQDPVKTIQIDGVP
REIRFYGETAVIMLDWDDPREIKFLPGCRRVTFDNKDSVILNFNEGYKQVEIDDQVFDIR
FGAPTRELYINGRWYECFFGGQPLGVIIDGKPRLLHLEGPLPQVDIGKAKRTDLVAGKIN
LIINATQMCPVYLDAKVQKIMINGQFFTLRFVDALRTVLINEKPFKVEFGDPRPIFIGKE
KLFIRFSAPPRGIKPGQIQIADMEGVTVPASLPAPATASPNRIERDSEEADEEPIARPKK
SPSPDSENQGLDMLASLMPSTIAPASGSEYSVAEPIFSKTDKIPGLETPAEEKPAQLPIL
GNININDLFAKLVATGIVQVAKDNKEDVKTDEMIPKQDKNVIRKVDLLKPETLKMPQPAL
AQRLYGGMQCSGCGARFPPEHTVRYSQHLDWHFRQNRRERDSARRAHSRAWHYDLPDWLR
YEELEELDERGIPCTPSHILTQGQYISKQFTLIARIYIPVAVTHISY
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaatcgcagaggagtatgcatcgagcttggcagatctcaccgtgaacagc
aaacctcttataaatatgctaacaatattagcagaagagaacatcgaccatgccggggtt
atcgttgatacggtggagaaacatttggagaaggttcatccagaaatcaagctgccagta
ctctatttagttgattctataatcaagaatgtcggtggcgcatacacacagaagttttca
caaagcatcgtaaatatgttcacacggacattcaaacaggttgatgaaaaaataagatcc
cagatgttcaaactgcgggagacatggcatgatgtgttccccgctaccaagctctatcag
ttggatgtgaaagtgaacctgatagatccagcatggcctatccaagcgcagccgcagcaa
tctaacatccatgtaaatccaaattttctgaaaaagaattctgcagcggcaccaacaacc
agtgctgcagcaacgctcacagaagatgaagacaagatgcacagcatcctcgctaagaag
gaacaagaactcctcatgctgaaaagaaagaagatcgaaatggagctggagaaaacacgc
cggcagctcgagttggcagagaaaaatgctaaaatgggggttggtagcggcgtgtcggct
atgccggtggcggtggtgaatcccgcccctgcgcccgcgcccgcgcccgcgcctgcgcct
cctatctccgttaagcagcgattaggaccgccagtaaacaagccggcggcgggtcgcatt
gcgcccgtcagcggagccctggtctccgcgcgccgcgacccgcgtctggcgcgtcggccg
cagcccgcgcccgcagtgccccccctgccacacgtgccccacgtgcctccagtgtccgca
gtgtccacagtgcctcacgtaccccgcgccaacaacggcccgcccatagcacccaacgtg
ttcgacattaaacccctcgacagggtcacaaagcgcaagaacgtcatcactatcgacgta
cgtctcgaccccagcaaagacccgcgtcgccgcgacccgcgtctcgcggagcgcgcgcgc
gaccgcaggcacaagaagaacgacgacgaacgagagagaaagcgagatgaactccgacag
gagaaggacaaggcgcgcgataacgccttcaacgtccgcaccgcggtcgacgactacatc
gaccgactgcagatatccgatccgaaaaagatcaacaagctgcctccgatccccaaaata
aatagggacgagaataaagacgacgacgaacccgcgcccaccaaaaagagaaaggagaat
cctaaagagcgcagaaagaagaaggaacagaactccagtaaggagagttccagcagctcc
tcgcctgaaaaacgactaaagtctaaagagatgagaaagaagcctaaaacgaagctggag
gtggaggaggtgcatcctgttgtgacggaacctgtcacgttcaaagtgctaaagaatttc
aacaaagaccactacatgtgcaggaataaaaagaaatctgagagcccggagcgggaacct
gaaaagacggaagttgtgaaacctaatagtgaaccaaatgttctcgacgttgttatggag
accaaggacgttgaccttagggtcttgcagccggtgctcgaggctggagccgccgcggtc
gcgcagaaaagaccctccacagaaactgttgaaggcaagcctaagaagaataaacacgat
aaatttgatatcttattcggtaacgaggatgtggatctccgtcaattaccacaagtagac
gaagtggtacctcccccgccacccaccataacagagtcccttaaagttgaagtctccctt
gaagacgtcaaggacgagtgtccggtctccaccagttcgcccaaacagaaaaactggcac
gaggttaaggagaagaaagatgacacaaagaaaacaccctccaaattggatcttgttaga
gcgaaactcgcagaggccaccaaaggaaaagatcgattaggtcgaccgctacttttcagt
aaatcgccgagtattgagagggagaggcggcgcacgctcagctctgacgacggtgaccag
aagtccgacagcggggacgatttcacacccgaacacaacaagaagaccatatcgattatc
atgtcccaagcgaaggaacagttcagcgacggcaaactgaataaggaccagtacaacact
ctgatgtaccaagtgctgcagctcaacgagaagctaaagctaaaagaggccaagcagaga
gagtcgctcgagctgtccaagcggaagctaaaggcgcacatcgacgaagaaaatcacaag
gtcgtcagccccaagtcttcgccctccgacatgaacaactttggcgatatagatgagaga
gtcgctccgaccccgtacttcgacaccccgcccgaaagccaaaacttcatgcaagactcc
gacatgagaaagaaacagatgggaccggactcgcccgacggcaagaatcaagctctgcta
cccctgcctcccatgatgcccatgtacatggctccctttcccatgtggaggggacaggca
agacctcggatggacgattttggacctcgaagatttagaggtccgatgccatcgttctat
agaggaaagttcgataaaaggggtccgcctagattaccctttgaccctcgccttccgtta
ccactgccgacgcccaagctgggcatgtgccagggggagagtccactgttgccctatgag
cgcacggcctcgccaccccccatcggcacgcccggacacaccatcccgccgactaacaag
aaaatcctcgactacatcgaccaagatcccgtcaaaacgattcagatcgacggagtaccc
cgggagattagattctacggggagaccgcagttattatgctggactgggacgatcctcgc
gagatcaagttcctgcctggctgcaggcgtgtcacgttcgacaacaaggattcagtcatc
ctcaacttcaacgagggctacaagcaagtggagatcgacgaccaagtcttcgacattaga
tttggtgctccgacgcgggagctatatatcaacggtcggtggtacgagtgctttttcggc
gggcagccgctcggcgtgatcatagacggcaagccgagactgttgcacctggagggaccg
ctgccgcaagtcgatatcggtaaagcgaaacgtacggacctcgtcgccggaaaaattaac
cttatcataaacgcgacccaaatgtgccccgtttacctggacgctaaagtgcaaaagatt
atgataaacggtcagttcttcacgctgcgttttgttgatgctctgaggacggtgttaatc
aatgagaaaccattcaaagtagaattcggagatccgaggcctatattcatagggaaggag
aagttgttcatccgattctcggctccgccgcgtggcattaagccggggcagattcagatc
gcggacatggagggcgtgacagtgcccgccagcctgcccgcgccggcgaccgccagcccg
aacagaatcgaaagagattctgaggaagcagacgaggaacctatagccagacctaagaaa
tcgccaagtcccgacagcgaaaaccaaggtctggatatgttggcaagtttaatgccatcc
accattgcgccagcgtcaggttcagagtacagtgttgctgaaccgatattcagcaagact
gacaagatcccgggcctggagacccctgccgaggagaagccggcccagctgccgatactt
ggcaatatcaacattaacgacctattcgccaagctcgtcgccaccggcatcgtacaagtc
gctaaagataataaagaagatgttaaaacagatgaaatgatacccaaacaggacaagaat
gttatacgaaaagtggatctacttaaacctgaaactttaaagatgccgcagccggcgctg
gcgcagcggctgtacggcggcatgcagtgcagcggctgcggcgcgcgcttcccgcccgag
cacacggtgcgctactcgcagcacctcgactggcacttccgccagaaccgccgcgagcgc
gactcggcgcgccgcgcgcactcccgcgcctggcactacgacctgcccgactggctgcgc
tacgaggagctcgaggagctggacgagagaggtatcccatgcacaccatcacacatcctc
actcagggacaatatatctcaaaacaatttactttaatagcgagaatatacataccagtc
gctgtcacacacataagctactag
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