Physcomitrium patens (spreading earthmoss): 112276820
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Entry
112276820 CDS
T01041
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112276820
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
112276820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
PHF12_MRG_bd
ABC_tran
AAA_27
Motif
Other DBs
NCBI-GeneID:
112276820
NCBI-ProteinID:
XP_024364315
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All DBs
Position
24:3474165..3485865
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AA seq
1062 aa
AA seq
DB search
MSSDRKRPIPLDSRSSKRARTSAIRAGDEFLPGNITEIEVHNFMTYTYLKSKPGARLNLV
IGPNGTGKSSLVCAIGIGLAGEPSLLGRATSIGDYVKRGEVSGSIKITLQDQNPDKKISI
TRKINKQNKSEWLLEENKSIHSVTKKEIQEVVARFNIQVNNLTQFLPQDRVCEFAKMTPI
QLLEETEKAVGDPELSTQHLTLIKKNADLKKIETSLKQRESVLANLKANNADLEKDVRRL
QERKSLLEKAENLKKKLPWLKYEQKKALLLEAKDKERNAKRLLNEAAETTNRLKKPAEEW
RKKRSDIESTIRKLQQQHDRLESHRRQMIENESKMGEQVRAKNREIVEVNKRESIRKEKI
VAATRDLATAEAELADLPDYEPPKQELQEIGNRIREFELGMIERKNQRGEKQQLYSQKQQ
QRDQITRRIAEIDNVKNRLLQALKDSGARGVVDAHNWVQSHRNEFQNDVYGPVLLEINIA
NMEHAKYVENHVPRYIWKAFISQDDRDRDYLQKNLEGMEVPIINAKDLSQRNAPAVTPQM
QEMGITARLDEVVSAPPVIKHVLNGQAALDYSFIGTSQANARADEANALGVNDLWTPENH
YRWNRSLYGSQVSASVTAVRASRLFSQNIDTRKKNDLESQLEVVEKELEQLGQEGRKIDS
DIRTLEDEAAALHKQREEIFNKMKLEKKKRADMTSRIDQRRRKLESIHAEDCKSAEEKLR
AEITKLNQERKKNVLKLKDVVKEYAKNQIQLIFEQLASAEIDLKVREQERELKSHEQLAL
QYQREYDDSKMETGRCRQQLENAKRAAEQVAAITNELQNMFREMPDTVEDLEYLISDTLA
EANAVLCNNPGVLEEYERRCKQIENLEDDLGTERAQLQDCLSEIDSVKAKWLPTLRTLVT
KINDTFGHNFREMAVAGEVSLDEHGTDFDKYGILIKVKFRETGELQVLSAHHQSGGERSV
STILYLVSLQDLTHCPFRVVDEINQGMDPQNERKMFQQLVRAASQMNTPQCFLLTPKLLP
NLEYTDACTILNIMNGPYIDEAARKWEDGPSWGKITESVASH
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggatcgcaagcggccaattccgttggattcacgaagttcgaagcgggcgagg
acgagcgctatcagagctggagatgagttccttcctgggaacatcacagaaattgaggtt
cacaatttcatgacatatacgtatttgaaatcaaaaccaggggcgcgtttgaatcttgtc
ataggtcccaatggcacaggcaaaagttctctggtctgtgcaattggtatcggtctcgct
ggagaaccttcgctgcttggccgtgctacaagtattggggattatgtgaagcgaggagag
gtgtcagggtcgattaaaattaccttgcaggatcagaatcctgataaaaagatctccatc
actcgcaaaatcaacaaacaaaacaagtctgaatggcttcttgaagagaataagagcatc
cactcggtcacaaagaaagaaattcaggaggttgttgctagattcaacattcaagtcaac
aatcttactcagtttcttcctcaggacagggtgtgtgaatttgctaagatgacccccatt
caacttttggaggaaactgagaaagcagttggagatccggaattgtcgacacaacatctg
actcttattaagaaaaatgctgacttgaaaaaaattgagacaagtttgaaacagcgcgaa
tcagttttggccaatctgaaagcaaataacgcagacttggagaaggacgtgcgacgcctt
caagagcgcaaaagcttattggaaaaagctgagaacctcaagaaaaagctaccttggttg
aagtacgagcagaagaaagcgcttttattggaggcaaaagacaaggagcgaaacgccaag
cgtctgcttaatgaagcagctgagacaacaaatcgtctaaagaaaccagcggaggaatgg
aggaagaagaggtctgatattgaatcaaccataaggaagttacaacaacaacatgatcga
ttggagtctcatagacggcagatgatagagaatgagagtaaaatgggagaacaagttcga
gcgaagaatagggaaattgtggaagttaacaaaagagagagcattcggaaagaaaaaatt
gttgcagctaccagagaccttgcaactgctgaagcagagctagctgatctgcctgattat
gaacctccaaaacaagaactccaagaaatcgggaaccgaatccgggagtttgaacttggg
atgatagagaggaagaatcagagaggggaaaaacaacaactttactctcagaaacaacaa
caacgtgatcaaattactcgcagaatagcagaaatagacaatgtaaagaaccgtcttctc
caagctttaaaagattctggtgctcgaggggtggttgatgctcacaattgggtccagagt
catcgcaacgaattccaaaatgacgtttatggccctgttctacttgagataaatatagca
aacatggagcatgcaaagtacgtggaaaatcatgttcctagatacatttggaaggcattt
atatctcaagatgatcgtgatagagattaccttcaaaagaatctcgagggtatggaggtt
cctattatcaatgcaaaagatctcagtcaacgtaatgcacctgctgttacaccccagatg
caagaaatgggtattaccgcacggcttgatgaggttgtatctgctcccccagttatcaag
catgttctcaatggacaggctgctcttgactattctttcattggaacgtcacaagcgaat
gccagagcagacgaagcaaatgccttgggagtgaacgatttgtggactcctgagaatcac
tatcgatggaatagatctttgtatgggtctcaagtttctgcaagtgtcactgcagttcgg
gcaagtcggttgttttcacaaaatattgacacgaggaaaaagaatgatctcgagagccag
ctagaagttgttgaaaaagaacttgaacaacttgggcaggagggtcgaaagatcgatagc
gacattcgtactcttgaagatgaagctgcagctcttcacaagcagcgggaggagatcttc
aacaaaatgaagctggagaaaaagaagcgtgctgacatgacttctcgaatagaccagcgg
agaaggaaattggagtccattcacgcggaggactgcaaaagtgctgaagagaaactacgt
gcggaaatcactaaattaaaccaggagcgaaagaagaatgtgttgaagttaaaggacgtt
gtaaaggagtatgcaaaaaatcaaattcaacttatatttgaacagctcgcttcagccgaa
atagacctgaaggttagggaacaggaaagggaactcaagagtcacgaacagcttgcttta
cagtatcagagggaatatgacgacagtaaaatggaaacaggaaggtgtcgacaacaattg
gaaaacgccaaaagagctgcagagcaagtcgctgcaatcacgaatgagcttcaaaacatg
tttagagagatgcctgacacagtagaagaccttgaatacttaatcagtgacacattagct
gaggcaaatgctgtgctctgtaacaatccgggtgttctcgaggaatatgagaggcggtgc
aagcagattgaaaatttggaagatgatttaggcactgaaagggcacaacttcaagattgc
ttatcagaaattgactccgtcaaggccaagtggctcccaacacttcgcaccctcgtaacc
aagatcaatgatacttttggccataacttcagggaaatggccgttgcaggggaggtctca
ctggatgagcatggcactgacttcgacaagtatggcattctaatcaaagtaaaattcagg
gagacgggagagctgcaggtgctaagtgctcaccaccaatccggaggggaacgctcagta
tcgacaatactgtacctcgtctcccttcaagatctgacacactgcccctttcgtgtggtg
gatgagatcaatcagggtatggacccacaaaacgaacgaaagatgtttcaacagcttgtg
agggctgccagtcagatgaacactccgcaatgctttctcttgaccccgaagcttctcccg
aacttggagtatactgacgcctgcactattctgaacatcatgaatggtccttacatagat
gaggctgccagaaagtgggaagatggaccttcgtgggggaagatcactgaatcggtggcg
tcacactag
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