Physcomitrium patens (spreading earthmoss): 112280007
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Entry
112280007 CDS
T01041
Name
(RefSeq) methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like isoform X1
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00280
Valine, leucine and isoleucine degradation
ppp01100
Metabolic pathways
Module
ppp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112280007
Enzymes [BR:
ppp01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
112280007
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Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
MdcE
Motif
Other DBs
NCBI-GeneID:
112280007
NCBI-ProteinID:
XP_024370661
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Position
3:15628034..15634525
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AA seq
693 aa
AA seq
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MAQILQRKSNQWSCYLREEWITSVYALIAPGLNEGSSSLGIPSLLHRNFVRGGRNLVPGA
EASRSGSNGGNIAGDLDSKITTATRGYQYHAFRKYSSLYCKLGTFSRVGDLSSNHFLADL
ASAPTVHGVDIKKSFYNVFNSRRRNFMSMDHELNVLKDDVKTGSEIFVKNKKAMEELLLD
LQQKVEKVRLGGGVKAVERHKSRKKYLPRERIDYLLDPGSPFLELSQLAGHELYTDDLPS
GGIVTGIGSVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCNLPCIYLVDSGGA
NLPRQAEVFPDRDHFGRIFYNQARMSEEGIPQIALVLGSCTAGGAYVPAMADESVIVKGN
GTIFLAGPPLVKAATGEEVSAEDLGGAALHCKISGVSDHFATDELHALAIGRKIVKNIHF
AGITNRSSPSNVMSEESRDPLYSPDELHGIVPADARISYDIRSVIARIVDGSEFDEFKKL
YGSTLVTGFARIMGQPVGIVGNNGILFTESALKGAHFIQLCAQRHIPLIFLQNITGFMVG
SRSEASGIAKAGAKMVMAVACAKVPKITIVVGGSHGAGNYGMCGRAYSPNFLFMWPNARI
SVMGGAQAAGVLAQVERDKRRRDKTEWSEEEEEKFKEKVMQGYDREGHPYYASARLWDDG
IIDPADTRRVLALCLSASLQTSPKETKYGVFRM
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaattcttcagagaaaaagtaatcaatggtcgtgctatcttcgagaagaatgg
ataacatccgtgtacgcattgatcgcaccagggcttaacgaaggaagctcatcactagga
attccctctcttttacataggaatttcgtccgtggaggtcgaaatcttgttccgggcgct
gaggcttcaaggtccggctccaatggaggaaacatcgctggagaccttgattctaagatt
acaactgccacaagaggctatcaatatcatgcttttaggaaatattcctctctgtactgc
aagcttgggacgttttcaagggtgggtgacttatcgtcgaaccatttcctcgcggacttg
gcttctgcaccaactgttcatggagttgatattaagaaatcgttttacaatgtcttcaat
tcaagacggaggaattttatgagcatggaccacgagttgaatgttttaaaagatgatgtt
aaaacggggagtgagatcttcgttaagaacaagaaggcgatggaagagcttctgcttgac
cttcagcaaaaagttgaaaaagtacggcttgggggtggagttaaagctgttgaacgccac
aagagtcgtaagaaatacttgccgcgtgagcgtatcgactaccttcttgatcctggatct
ccgttcttagaactttcgcagcttgcaggacatgaattgtacaccgacgatctaccatca
ggtgggatcgtgacaggaattggatctgttcatggccgtctctgcatgtttgttgcgaac
gatcctactgttaaagggggtacctattacccaatcactgtgaaaaagcacttacgagct
caggaaatagcatcccagtgtaacttgccatgcatataccttgttgacagtggcggggct
aatcttccaaggcaagcagaggtttttccagaccgcgatcacttcggccgcattttttac
aatcaagcacgcatgtcagaagaagggattccgcagatagcactagttttaggatcctgt
accgctgggggtgcgtatgtgccagctatggctgatgaaagcgtcatcgtcaaaggaaat
ggcacaatctttcttgctggtccacccctagtcaaggcagcaactggagaggaggttagc
gccgaggatctaggaggtgcggcactgcattgtaaaatatccggtgtttcggaccacttc
gctactgatgaacttcatgcacttgcaattggtcgcaaaatagtgaaaaatattcacttt
gcggggattaccaacagatcctcccctagcaacgttatgagtgaggaatccagagatccg
ctgtacagcccagatgaacttcatggtattgtcccggcggacgcccgaatatcctatgat
ataagatctgtaatagctcgcatcgttgatggaagtgagtttgacgagttcaagaaactc
tatggctctactcttgttactggattcgcaagaatcatgggacaaccagtgggaattgtg
gggaacaatggcatacttttcacggaatcggctttgaaaggggcgcattttattcagctc
tgtgctcaacgccatattcctttgatttttctccagaatatcacaggtttcatggtgggg
tccagatcagaggcaagtgggattgcaaaagcaggtgctaagatggttatggctgttgca
tgtgccaaggtgccaaaaattactatcgtggtgggaggaagccatggagctggcaattat
ggaatgtgtgggagggcatacagtcccaactttctcttcatgtggcccaatgctcgaatt
tctgttatgggcggggctcaggctgcaggtgttctagcacaagttgagagagacaagaga
aggcgcgacaaaactgaatggagtgaagaggaggaggaaaagttcaaggagaaggtgatg
caagggtatgatcgagaaggacacccctattatgcgagtgcacggctctgggacgatggc
attattgatccagcagacactcgacgggttctggcgctctgcctctctgcctctctgcaa
acgtctccaaaggagacgaagtatggagtcttccggatgtga
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