Physcomitrium patens (spreading earthmoss): 112288942
Help
Entry
112288942 CDS
T01041
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112288942
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppp01002
]
112288942
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112288942
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112288942
Peptidases and inhibitors [BR:
ppp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112288942
Ubiquitin system [BR:
ppp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112288942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
SASP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
112288942
NCBI-ProteinID:
XP_024389476
LinkDB
All DBs
Position
11:12431753..12442648
Genome browser
AA seq
1118 aa
AA seq
DB search
MTVIAAPPEEDDDMLVPPQDFNDVIEPMEVVGQGEGVATVENQHVDDPQTGKFTWNIENF
SKLSLRKHYSETFTVGGYKWRVLLFPKGNNVDHLSVYLDVADSAQLPYGWSRFAHFTLAV
VNPYDPKLTVKKDTQHHFNVRESDWGFTSFMPLPDLYDPSRGFLMNDTLIVEADVNVRKV
VDYWAYDSKKETGYVGLKNQGATCYMNSLLQTLYHLPYFRKAVYHMPTTENDVPSNSIPL
ALQSLFYKIQYSDTSIATKDLTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTAVEG
TIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYESFDKYVEVERLEGENK
YHAEQFGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENG
KYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEEPKRA
LEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKIVCNVDEKDIAEHLQV
RLKKEQEEKERKRKEKAEAHLYTIIKVGRDEDLQNQIGKDIHFDLVDHEKVRSFRIQKQT
LFTQFKEEIAKELGVPVECQRFWLWAKRQNHTYRPNRPLTEQEEAQTVGHLKEASNKAHN
AELKLFLEVQRTPGAESVPMPPPIKTKEDVLLFFKLYDPLKEELRYVGRSYVKASGRPAD
ILERLNEMAGFPPNEEIQLYEEIKFEPNVMCEHIEKKSTFKASQLEDGDIICYQRALTRE
QELASRYPDVPSFLEYVRNRQIVHFRRLDKPKDDEFCLELSKQHTYDDVVEKVAEEIKLE
DASKIRLTSHNCYSQQPKPQPIKYRGVERLSDMLVHYNQTSDILYFETLDLPLPELQGLK
TLKVAFHNAKTEECMQVSVHNIRLPKQSTVGDVVNELKGKVELSSPKAELRILEVFYHKI
YKIFPLSEKIENINDQYWTLRAEEVPDEEKELGPQDRLIHVYHFTRDASQNYMVQNFGEP
FFLVVRENETLTEVKQRIQKKLVISDEEFSKWKFAFLSLGRPEYLQDGDVVAARFQKRDT
YGAWEHYLGLEHADCAPKRSHTTNQNRHNFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatcgctgcacccccggaagaggatgatgatatgctggtgcctccccaggac
ttcaacgacgttattgaaccgatggaagtggtagggcaaggagaaggtgttgctactgtg
gagaatcagcatgtggatgaccctcaaacggggaaatttacatggaatatcgagaatttc
tcgaaattatctctgagaaagcattattccgaaacgtttactgttggtggttacaaatgg
cgggtgctgttatttccgaaaggcaataatgtggatcatctctcagtatacttggatgtt
gctgattccgcgcagctaccctatggctggagtagatttgcacattttactctggccgtt
gtgaatccgtatgacccaaagttgactgtcaagaaagatacacagcatcattttaatgta
cgcgaaagtgattggggattcacatcgttcatgcctttaccagacttgtacgatccatct
cgaggtttcttgatgaatgatactcttatcgtagaagctgatgtgaatgttcgtaaggtg
gtcgattactgggcgtatgattcgaagaaagagacaggttatgttggattgaagaatcaa
ggagcgacatgctacatgaattctctcctccagacgttgtatcacctgccctactttcgg
aaggctgtttatcatatgccaacgactgaaaacgatgttccatctaacagcatccctcta
gccctacagagcttattttataaaattcagtacagtgatactagtattgctacaaaggat
ctcactaaatcttttgggtgggacacctacgactcttttatgcaacatgatgttcaagag
ctgaatcgggttctttgcgagaagctggaagacaaaatgaagggaactgctgtcgagggc
acaatccagcaactgttcgaagggcatcacatgaactacatagagtgcatcaatgttgat
tataaatcaacacggaaagagtctttctatgatttgcagctggatgtgaaaggatgcaag
gatgtatatgaatcttttgacaagtatgttgaagtagaacggttggagggcgagaacaaa
taccacgccgaacaatttgggttgcaggatgcgaaaaaaggagtcctatttatagacttc
ccccctgttcttcagctacagttaaagcgttttgagtatgactttatgcgagacacaatg
gtgaagattaatgatcgctatgagtttccactgcaactagacttggatagggagaacgga
aagtacctctctcctgatgccgaccgtagtgttcgaaatttgtacaccttgcacagtgta
ctggttcacagtggtggagtacatggtggtcattactacgcttttatcagacccacactc
tctgaccagtggtttaagtttgatgatgagcgagtgacaaaggaggagcctaagagagct
cttgaggagcagtatggaggagaggaggaacttccacaaacaaatccaggttttaataac
actcccttcaagttcacaaaatactcaaacgcatacatgttggtgtatatcagagaggcc
gacaaggacaagattgtttgcaatgtggatgagaaggatattgcagaacatttgcaggtg
aggttgaagaaagagcaagaggagaaagaaaggaagaggaaggagaaggctgaagctcat
ctttacactatcattaaggttggacgggatgaagacctacagaaccagattggaaaggac
atccatttcgatttggtagatcatgaaaaagttcgcagcttccgcatccaaaagcaaacc
ctctttacgcagttcaaggaggaaatagcgaaggagcttggcgtccctgttgagtgtcaa
cggttttggctttgggcgaagcgccaaaaccacacatatcgtcctaatagaccacttact
gagcaagaagaggctcaaacggttgggcacttaaaagaggcctccaacaaggctcacaat
gctgagttgaaacttttcttggaggtgcagcgcacccctggtgcagaatcagttccaatg
cctcctccaattaagacgaaggaggatgtgcttttgtttttcaaactgtacgatcctttg
aaggaggagttgcgttacgtaggtagatcttatgtaaaggcaagtggtagaccagctgat
attttggagcggctaaatgagatggccggatttcctccgaacgaggagatccagctgtac
gaggaaatcaagtttgagccgaatgtcatgtgcgagcacattgaaaagaagtccactttc
aaggctagccagttggaagatggtgatattatctgttaccagagagctctaacaagggag
caggaattggcttcccggtaccctgacgttccatcatttttggagtatgttcgcaaccga
cagatcgtacattttcgtcgcctagacaaacccaaggatgacgaattttgtctggaattg
tcgaagcaacacacatatgatgatgtggtcgagaaggtagcagaagaaattaaattggag
gacgcgtcaaagatcaggcttacatcacacaattgttactcgcagcaaccaaaaccacaa
cccatcaagtatcggggggttgaaagactaagtgatatgctcgtacactataatcagacg
tcggatattctctattttgagactttggatttgccccttcctgagcttcagggtttaaaa
accttgaaggttgccttccacaacgcgaaaacagaggagtgcatgcaggtctcagttcac
aatattcgtcttcccaaacaaagtacagttggggatgttgtaaacgagttaaaggggaag
gttgagctttcaagtcctaaggcggagcttcgcattcttgaagttttctatcacaaaatt
tacaagatcttccccttgagcgagaagattgagaacatcaatgatcaatactggacgctt
cgagctgaggaggttcctgatgaggagaaagaacttggtcctcaagatcgcttgattcac
gtgtatcatttcacgcgtgacgcgtcacaaaattacatggttcaaaattttggagaacca
tttttccttgtggttcgtgagaatgagactttgactgaagtgaagcaacgtattcagaaa
aagctagtgatatctgatgaagaattctctaagtggaagtttgcgtttctttcactgggc
cgacctgagtatcttcaagatggagatgttgttgctgcccgttttcagaaacgagacact
tacggtgcatgggagcattatttggggcttgagcatgctgattgtgcaccgaaacggtca
catactacaaaccagaaccgtcacaacttcgaaaaacctgtaaagatctataattga
DBGET
integrated database retrieval system
