Physcomitrium patens (spreading earthmoss): 112289584
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Entry
112289584 CDS
T01041
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112289584
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppp02000
]
112289584
04147 Exosome [BR:
ppp04147
]
112289584
04090 CD molecules [BR:
ppp04090
]
112289584
Enzymes [BR:
ppp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112289584
Transporters [BR:
ppp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112289584
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112289584
CD molecules [BR:
ppp04090
]
Proteins
112289584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_25
DUF87
AAA_15
AAA_24
DLIC
RuvX
Motif
Other DBs
NCBI-GeneID:
112289584
NCBI-ProteinID:
XP_024390659
LinkDB
All DBs
Position
12:complement(7489830..7497021)
Genome browser
AA seq
1284 aa
AA seq
DB search
MTDHTIQDITVPSGQDEAPALDEQVKNSDKEKDKAEKQKEETKVVPFFKLFSFADKWDYI
LMIVGTIGAVGNGVSMPLMTLIFGDLVNAFGQNQSDLSELVRAVSEVAVKFVYIGIGAAV
ASYLEITCWMITGERQAARIRSLYLKSILRQDIAFFDQETSTGEVISRMSGDTILIQNAI
GEKVGTFIQLLFMFLAGFAVAFVQGWKLTLVMVATIPLLALSGGLMAMMVSKMSGAGQEA
YAEAGTTVEQVVSSVRTVLSYTGEIKSVIEYDHAIAKAAKLGINSALASGFGIGFALFVM
FASYALAMWYGSILVANHELSGGNVLSVIFAVLTGGGSLGQASPCVQAFASGKAAAYKMF
EVIKRKPVIDAYDLSGETLKALKGDIELRNVYFTYPSRPDVPIFKNFNLSVAAGTTVALV
GESGSGKSTVVSLVERFYDPNQGQVLVDGVDIKTLQLRWLRRQVGLVSQEPVLFGTSIKE
NIAYAKDDATDEEVQAAASLANAATFINKMPKGYETKVGERGIQLSGGQKQRIAIARAIL
KDPKILLLDEATSALDAESECVVQEALEKVMADRTTIVVAHRLTTIRNANLIAVIQRGVV
VETGSHDELLSRPDGAYTQLIRLQQVNKQQDADMYNDLDLDVDTAAIGRSLSKGSHGSRR
RSLQRKSPHASRRVHDQLGKSGRSEGTDVESGDKENQKRADTSIFRLAKYSKPETPLFLI
GSLAALANGTSFPIFGLLLSNIIAVYYITEPKKLRHDANFWSLMYLVLAIGIFIVSPIQF
YSFGVIGQNLIRRLRRLTFEKVLGNEVAWFDEDNNGSGSIGARLSTDAAAVKGMIADTLS
IVMQNIGNIICGLTIAFIANWQLSLLVLALVPLLGSQGYFQMKMMQGFSNDAKEAYEDAS
RVANDAISSVRTVSSFCAQERVVALYEEKCEKPLKSGIRQGYLSGTGLAFSNFVLFACYA
LAFWFGSKLVQQDKASFEDVFKVFFAITMSAFGVSQGASLTPDLSKTKLAVNSIFELLDR
KSLIDPYNTSGKTLMPLKGDIELRNISFTYPSRPTIPIFKDLSLTVPAGKTVALVGESGS
GKSTVISLLERFYDVDSGSILLDGVDITQLQIRWLRQKIGLVSQEPVLFNTSIKANIIYG
RDDDVTETEIESAAKASNCHKFIVGLPEGFNTTVGERGVQLSGGQKQRVAIARAIVKDPR
ILLLDEATSALDAESEHVVQEALDRIMVNRTTIVVAHRLSTIRNADVIAVVKNGSIVEQG
KHDELMARQDGAYHALVRLHMSSK
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccatacgattcaggatattacagtgccttctggccaggatgaggcgccggca
ttggatgagcaagtgaagaacagtgataaggaaaaagacaaggcagagaagcaaaaagag
gagaccaaggtcgtgccattcttcaagcttttttcgttcgcggataaatgggattacata
ctgatgattgtaggcactattggtgcagtcggtaatggtgtatctatgcctctcatgacg
ctcatcttcggcgatctcgttaatgcttttggtcagaaccaaagtgatctaagcgagctg
gttcgtgcggtctctgaggttgccgtaaagtttgtctacatcggtatcggggctgccgtt
gcatcatacttggaaattacgtgctggatgataactggagagcgtcaagccgcccgcatc
aggagtctgtatctcaagtctattctgaggcaagatattgccttctttgatcaagaaact
tcaaccggcgaggtgatcagtcggatgtccggagataccatacttattcaaaatgcaatt
ggcgagaaggtcgggactttcatacagctgctgttcatgttcctcgctggctttgcagtt
gcattcgtccaaggctggaaactgactttagtaatggtggcgaccatacctcttctagct
ctttcaggcggccttatggcaatgatggtgtcgaaaatgtcaggcgcaggccaggaagct
tatgctgaagcaggcaccaccgtggagcaagtcgtcagctcagtccgaacggtgttatct
tacactggtgagataaaatctgtgattgagtatgatcacgctatcgccaaggctgctaag
ttgggaataaactcggcattagcttccggtttcggcatcggcttcgcactttttgtgatg
ttcgctagctatgcgctggccatgtggtatgggtccatacttgtagctaaccacgaatta
tctggaggcaatgtgctcagtgtcatatttgcagttctgactggtggggggtctttgggt
caagcctccccatgcgttcaagctttcgcctctggtaaagcagcggcgtataaaatgttc
gaagtcattaagcgcaagcccgtgattgatgcgtacgacttgagcggtgaaacgttaaaa
gccctcaaaggagacattgagttacggaatgtttatttcacctaccctagtcgtcctgat
gtgcccattttcaaaaacttcaacctctctgtggctgctggtactactgtcgcattagtg
ggagaaagtggaagtggcaaatccacagttgtcagtcttgtggagaggttttacgatcct
aatcaagggcaagtactggtagatggggttgatatcaagacccttcaactgaggtggctt
aggcggcaagttggtcttgtgagccaggaaccggtattgttcggcacctcaatcaaggaa
aatattgcatacgcgaaggatgatgccacagacgaggaagttcaagcagcagctagcttg
gcgaatgcagccactttcatcaacaagatgcccaaaggctatgaaactaaagttggagag
cgaggaatacagctatcaggaggtcaaaaacagcgtatagcaattgcaagagcaatactc
aaggatcctaaaattctgttgttggacgaagcaaccagtgctttggacgcagaatccgaa
tgcgtggttcaagaagcgctcgagaaggtcatggctgatcgcactacaattgtggtcgct
catcggcttacaacaatccgtaatgcgaatctcatagctgtcattcaacgtggtgtggtc
gtagaaacagggtcacatgatgaacttttatccagaccagacggagcatatacacaactg
attcgtttgcagcaggttaacaagcagcaagacgctgatatgtataacgatttagatctg
gacgtagacactgcagccatcggcaggtctcttagcaaaggctcacatggcagccgccgg
cgtagtcttcagcgaaagtcaccacatgcatctcggagggtacatgaccagcttggaaag
agtggcagatccgaaggaactgacgttgagtcaggagataaggaaaaccagaagcgcgct
gatacttctatctttcgacttgccaaatacagtaaacctgaaactcccctttttctgata
ggttctctcgccgccctcgcaaacggaacttcatttccaatctttggacttctattgtca
aatattattgctgtttactatatcaccgaaccgaagaaattgagacacgacgcgaatttc
tggtccctcatgtacttggtactggcaattggaatatttatagtttccccaatacaattc
tactcatttggggtgatcggccagaatcttattcgtcgcctccgtagattgacttttgag
aaggtgttaggaaatgaagtggcgtggttcgatgaggataacaacggcagtggctctatt
ggtgcacggctatcaacggatgcagcagctgtgaaaggcatgattgcagacacactctca
attgtcatgcagaatatcggcaatattatctgcggactaaccatagcattcatcgccaac
tggcaactctcacttctggtcctcgccttggttccactcttgggctcacaagggtacttc
caaatgaaaatgatgcaaggctttagcaacgatgccaaggaagcatacgaggatgcaagt
cgtgttgccaacgatgcaatctccagtgtccgcaccgtgtcgtccttctgcgcacaagag
agagtagtggctctgtacgaagagaagtgcgaaaagcctctgaaaagtggcattcgtcaa
ggttatctcagtgggactggcttggctttctccaactttgtcctctttgcgtgctacgca
cttgcattttggtttgggtcgaagctggtgcagcaagataaagctagtttcgaagatgtc
ttcaaggtcttctttgccatcacgatgagtgctttcggtgtctcacagggcgccagttta
acacctgatctaagcaaaacgaagctcgctgtgaattccatttttgaactgctcgatcga
aaatcactcattgacccctacaatacttctgggaagacgttaatgccactaaaaggggac
attgagctccgaaatatcagcttcacttatccctccagacccacgatacccatattcaag
gacttgagcctcactgtgcccgctggcaagactgtggcacttgttggcgagtcgggttcg
ggcaagagcacagtgatttcgctactcgagcgcttctacgacgtggatagcggctccatc
ctgcttgatggtgtcgatattacgcagttgcaaattcgttggctaagacagaaaatcggg
cttgtgagccaggaacccgtcctcttcaacacttctataaaagcaaacatcatatacgga
agggatgatgatgtcacagagacagaaatagagtctgctgctaaagcctcgaactgtcac
aaattcatcgtgggcttacctgagggtttcaatacgaccgttggagagcgtggggttcag
ctttcaggaggacaaaagcagagagtggccattgcgagggcgatcgtcaaggatccccga
atcctgctgctggatgaggccaccagtgcgctggacgctgaatcagaacacgtcgtgcaa
gaggctcttgaccgcatcatggtgaaccggactaccattgttgttgctcatcgtctctcc
accatccgcaacgctgatgtaattgctgtggttaaaaacggatccatcgttgagcaagga
aaacacgacgagctgatggcgagacaggatggggcgtatcatgctcttgtgcggcttcac
atgtcctccaaataa
DBGET
integrated database retrieval system
