Physcomitrium patens (spreading earthmoss): 112290433
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Entry
112290433 CDS
T01041
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112290433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112290433
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
112290433
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112290433
Multi subunit Ring-finger type E3
ERAD complex
112290433
LMBR1L-GP78-UBAC2 complex
112290433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
CUE
zf-RING_5
zf-C3HC4_4
Prok-RING_4
RINGv
PHD
zf-RING_16
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
112290433
NCBI-ProteinID:
XP_024392413
LinkDB
All DBs
Position
13:6796903..6804010
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AA seq
582 aa
AA seq
DB search
MEPRYGPVVALYTALSLGGIAWKLNSALWSIDKDLQGLDPTEAARILQSLLQSSVVVALL
ANLMVNFFLLITLSMKFIFFGRLSLSETQKVVERLINYVLFKGLFLTWVVRPEMMQIAIW
LGWFSVLGFLKMFQGLARDRLEYLSASPSATILSHLRVYTVLYFVLLFDLLWMQLCFLLF
KDIGTSTFLLLFFEPLCIALDTLQAVIVHGMQLMDTWQRQNLDISAHDISLQPSERSAAG
AAWEWRGTVVRNCSFVMDIVSLLLALGHCVHIWWLRGLAFQVIDAILFLNLRALLSAISK
RIKGFMRLRKAMTTLQGALPDATQEELLAYEDDCAICKEPMATAKRLPCAHLFHLTCLRS
WLDQGLAETYSCPTCRRPLFMGGSLTATPNSQRLVDAPTISPVTNEIQAQVLLQHDLVLS
PSPPLTDLVPTPTPHWSAPVTSTWTGTAQEVGSVGVVAAIDEANGTTGAQNTGGRLGRLR
LMMRQLSESGHSHDHGLVENGNWNWWPFGGESSVQSSRHNRHESAGGLRLRNNSIGLATR
ADPRISAMVDMVREVLPNVADELILQDLMRTNSVTATVNNLL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggagccccgttatgggccagtggtggcactttacaccgctttaagtctaggtggaatt
gcttggaaattaaattctgctttatggagcattgataaagatctgcaaggactggatcct
actgaagcagctcgcatccttcaatctcttcttcaatcatccgtggtggtggccttactt
gcgaaccttatggtcaacttttttcttctgattacactttcaatgaagttcatctttttt
ggtcggttgtctctgtcagagacacagaaggtggtggagcgactcatcaattatgtattg
ttcaagggattattcttaacttgggtagtaagaccagaaatgatgcagattgccatctgg
ctgggatggttttcagtcttgggtttcctgaagatgttccaaggtttggcgagggatcgt
ctggagtacttgagtgcgtctccttctgcaacaattttgtctcacctaagagtttataca
gttctttattttgtccttctgtttgacttactctggatgcaactgtgttttttgttgttc
aaagacattgggacgagcaccttcttgttgcttttcttcgagcctctctgtatagcattg
gacacacttcaggcagtaatcgtacacggtatgcagttaatggatacttggcagcggcaa
aatcttgatatatctgcacatgatataagtttgcagccttcagagaggtctgctgcaggt
gcagcttgggaatggcgtgggactgttgtacgaaattgcagttttgtgatggatattgtg
agcttgttgctggctttgggccattgtgttcatatctggtggctacgaggtcttgctttt
caagtgattgatgctatcctttttcttaacttgcgggcgttattgagtgccatctcaaaa
agaataaaaggttttatgcgtctccgtaaagccatgaccaccttgcagggagcacttcct
gatgcaacacaggaggagcttttagcatatgaagacgattgcgcaatttgcaaggaacct
atggcaacggcaaaacggcttccttgtgcacatctcttccatcttacgtgcttgagatct
tggttagatcaaggattagcagagacgtattcatgtccaacctgtcgtagaccactcttt
atgggcggctcactgactgcaacacccaattcgcagcgactggtggatgctcccactata
tcccctgttacaaatgaaattcaggcacaggtgctactacaacatgatctggtgctatcg
ccatcgccaccccttaccgacttggtacctacgcctacaccacattggagtgccccagtc
accagcacgtggacgggcacagcccaagaggtaggctcagttggagttgtagcagcaatt
gacgaagcaaatggaacaacaggtgctcagaatacagggggtaggcttggtcgcttgcgc
ttgatgatgaggcagttgtcagagtcaggtcatagtcatgaccatggtctagttgagaac
ggcaattggaattggtggccatttggtggggaaagtagcgtccagtcaagcaggcacaac
agacatgaatcagctggtggtcttcgtttgcgcaataactcaattggattggccactagg
gcggatccaaggatttcagcaatggttgacatggtacgtgaggtgcttccaaacgtcgcg
gatgaactcattttacaggatttgatgcgaacaaattctgtaacagccactgttaataac
cttctgtag
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