Physcomitrium patens (spreading earthmoss): 112290637
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Entry
112290637 CDS
T01041
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112290637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112290637
Membrane trafficking [BR:
ppp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112290637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
112290637
NCBI-ProteinID:
XP_024392906
LinkDB
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Position
13:complement(746135..749220)
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AA seq
779 aa
AA seq
DB search
MAEFFAEVEAATGVRMPWNAWPNTQIEAAKCAVPFAAVVTPLHHGGGADSTAPPVNVLPY
PPLRCKTCRAVLNPFCRVDFDAKIWICPFCYQRCHFPSHYASISLNNQPGELYPQCASVE
YKMAGEAGLPPVFLFLLDTCLIEEELGYLKASLSQALTLVPENSLVGLITFGAQVHVHEL
GFSECPKSYIFRGAKDVTKEQILEQLGLTNRAAGGLQRGAPPPPVGVIAGIGEGISASSV
NRFLLPASDCEFTLNTLLDELQKDAWPFPSDQRAARCTGTALTVATGLLGACVPGTGARI
MAFVGGPCTVGSGTIVSKELSDPIRSHKDIDKDTVPFYHKAVKFYEGLAKQLVTQGHVLD
VFASALDQVGVAEMKVAIEKTGGLVVLSESFGHPVFKDSLKRVFETGDHALQLSFNGIFE
VSCSKEIKVQGVIGPCASLEKKGTSCSDTAIGQGNTTAWKLSGLDRSTTLAVFYDINPSS
QSGPTTAIGQQFFLQFLTFYQHYEGDMRLRATTITRKWVEAGTPGGVEELVGSFDQEAAA
VVMARLASHKMETEDGFDATRWLDRSLIRLASKFGDYRKDDAHSFNFAPNIAIFPQFMFN
LRRSQFVQVFNNSPDETAYFRMVLHRETVTNSLVMIQPSLLSYSFNSPPEPALLDVASIA
ADRILLLDAYFSVVVFHGMTIAQWRNAGYHKHEEHTAFAQLLQAPQDDAQAIIKERFPVP
RLVVCDQYGSQARFLLAKLNPSATYNSANGPAPGGDIIFTDDVSLQVFMEHLKRLAVQN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattttttgcggaggtggaagcggcaacaggggtgcgcatgccctggaatgcg
tggcccaacacccagatcgaagcagccaagtgcgctgtgccctttgcggccgtcgtgacg
ccattgcatcatggaggaggcgcagacagcactgccccaccggtgaatgtgctaccctac
cctccgcttcgatgcaaaacatgtcgagctgttttgaatcccttttgtcgtgtggatttt
gacgccaagatctggatctgccccttctgctaccaacgctgccacttcccctcacactat
gcctctatctcgctcaacaatcagccgggcgagctctacccgcaatgtgccagcgtcgag
tacaagatggccggggaggctggattgccgcccgtgttcctgttcctgctggacacatgc
ttaatcgaggaggagctgggctacttgaaggcgtctctctcgcaggcgcttacgctggta
ccggagaattcattggtagggctcattacgttcggggctcaggtgcatgtgcacgagcta
gggttttcggagtgccccaagtcgtacatatttcgaggcgctaaggatgttaccaaggaa
caaatccttgagcagcttggtctaactaatcgtgcggcaggagggttgcaacggggggca
cctcctccgcctgtgggtgtgattgccggaataggtgaaggcatctcggcttcgagtgtg
aacaggtttttgctcccggcatctgactgtgaattcacgttgaatactctgctggatgag
ctccaaaaggatgcgtggccttttccgtcggaccaaagggctgcacggtgcacggggacc
gcgctgactgtggcgactggacttctcggtgcgtgtgtcccaggtactggggctcgaatc
atggcttttgtaggagggccgtgcactgtgggatcgggaaccattgtttccaaagaactt
tccgatcccattcggtcgcacaaggatattgacaaggacactgtgccattttaccataag
gctgtcaaattttacgagggattagcgaagcagctggtgacacaggggcacgtgctggat
gttttcgcatctgctcttgatcaagttggggtagcagagatgaaagtggctattgagaag
actggcggtttagttgtcttatctgaaagttttggccatcctgtattcaaggactccttg
aaacgggtgtttgaaaccggggatcacgcacttcagttgtcattcaatggcatttttgag
gttagttgctctaaggagatcaaggtccagggggttattggtccttgtgcatcattggag
aagaagggaacgtcttgttcggacactgcgattggtcaggggaacaccacagcttggaaa
ttgagcggcttggatcggagtacaacgttggctgtgttttatgatatcaatccatcgtca
caatctgggcccactacagcaatcggtcagcaatttttccttcagtttctaactttttat
cagcactacgaaggagatatgcggctccgtgccactactattacgaggaaatgggttgaa
gcgggtactccaggtggagtggaagagctagttggaagcttcgatcaagaagctgctgct
gtggtcatggctcgactggcttctcacaaaatggaaacggaagatgggttcgatgcgacg
cggtggcttgaccgatctctcattcgtttagcgtcgaagttcggggattacagaaaagac
gacgctcattctttcaacttcgctcctaatattgcgatatttcctcagtttatgtttaat
ttgcgacggtctcaatttgtacaagtcttcaacaacagccccgatgaaacggcttatttt
cgaatggttttgcatcgagaaactgtaacaaactctttagtcatgatccaaccatctctt
ctatcctactcgttcaattcacctccagagcctgcactgctggatgtggcatccattgct
gctgaccggatcctcctattagatgcatacttcagtgtagttgtttttcacgggatgaca
atagcgcaatggagaaatgcaggctaccacaagcacgaagaacatacggcatttgcccag
ctgctccaagcgccgcaagatgatgcacaagctatcataaaggagcggttccctgtacca
aggttagttgtatgtgaccaatatgggtcgcaagctcgtttcttacttgcgaaattgaat
ccttcagctacatataattcggccaatggacctgcccctggtggcgacattattttcact
gatgatgttagtttgcaagtgttcatggagcacttgaaaaggctggctgtgcaaaactag
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