Physcomitrium patens (spreading earthmoss): 112293868
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Entry
112293868 CDS
T01041
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112293868
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppp01002
]
112293868
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112293868
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112293868
Peptidases and inhibitors [BR:
ppp01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
112293868
Ubiquitin system [BR:
ppp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
112293868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
112293868
NCBI-ProteinID:
XP_024399564
LinkDB
All DBs
Position
16:complement(8017529..8020881)
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AA seq
342 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLELESLSQLRPVYGLVFLFKWRAGEKDG
RPVLKDYNPNLFFASQVINNACATQAILSILMNRPEIEVGPELSTLKEFTRGFPPELKGL
AINNSEAIRTAHNSFARPEPFVAEEQKVADKDDDVYHFISYLPVDGVLYELDGLKEGPIS
LGECGGEGPDSMDWLQMVQPVIQERIEKYSKSEIRFNLMAVIKNRKDIYNEEMTQLEMRR
ARLWDRIEKLEGKRDDTMDVDSGDEEVGPVSIDKLRNEFADVESELAKVQDKIAMEDEKF
RKWKTENIRRKHNYIPFLFNFLKILAEKKQLRPLIEKARQKT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgtacaattgagtcggatccaggggtattcacggaattgattcaacaaatg
caagtgaaaggggttcaggtggaagagctttatagtttggaactcgaatccctttcacag
ctcaggccagtgtacggtcttgtttttttgttcaaatggcgagctggggaaaaggatggc
cggcctgtattgaaggactataacccaaatctcttcttcgccagccaggttatcaacaat
gcatgcgcaacacaggctatactctcaatcctcatgaacaggccggagatagaggttgga
ccagaactctcaacattgaaggaattcacgcggggtttcccccctgagttgaaggggctg
gccatcaacaacagtgaagctattcgcacggctcacaacagtttcgccagacctgaacca
tttgtggcagaggaacagaaagttgcagacaaagatgatgacgtgtaccacttcatcagc
tatttgcctgttgatggtgttctatatgagctcgatggactaaaggagggccccatcagt
ttaggcgaatgcggcggtgaaggccccgattctatggactggctgcagatggtgcaaccc
gttattcaagagagaattgagaagtattccaagagtgagatcaggttcaacctcatggct
gttataaagaatagaaaggatatatataatgaagagatgacacagcttgaaatgaggcga
gctcggttgtgggatcgcatagagaagctggaaggaaagcgggacgatacaatggacgtg
gactcgggagacgaggaggttggtccagtgtccattgataagctacgtaatgagtttgct
gatgtggagtcagagcttgctaaagtgcaagataagatagccatggaggatgagaagttt
cgcaagtggaagactgagaacattcgcaggaagcataactatatccctttcctgttcaat
tttctcaagattttggcagagaagaagcagctgagacctttgattgagaaggctcgtcag
aaaacttga
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