Photobacterium profundum: PBPRA2482
Help
Entry
PBPRA2482 CDS
T00173
Symbol
VV1227
Name
(GenBank) putative pseudouridine synthase family 1 protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppr03009
]
PBPRA2482 (VV1227)
Enzymes [BR:
ppr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PBPRA2482 (VV1227)
Ribosome biogenesis [BR:
ppr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PBPRA2482 (VV1227)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAG20864
UniProt:
Q6LPB2
LinkDB
All DBs
Position
1:complement(2875243..2876376)
Genome browser
AA seq
377 aa
AA seq
DB search
MSIMSEKLQKVLARAGQGSRREIELMIQSGRVSIDGVVAKLGDRLDDFSVLVRIDGHKID
LVSPSEEVCRVLAYNKPEGELCTRHDPEGRRTVFDRLPRLSSGRWVSVGRLDANTSGLLL
FTTDGELANRLMHPSRSVEREYMVRVFGEINENMVKNLVQGVELEDGMARFEDVVYSGGE
GMNHTFYVVITEGRNREVRRLWDSQGVTVSRLKRVRYGDIYLTKDMPRGGWMELELKEVN
YLREVVELEAEENTMLTVEGLKRKRGVRQIRRAVRRHEERVTETPRGRRGRTNTPDERRS
STRNSEAEGQNVPVGKRKPSGKPSTAKPTRGKPSAGKPAQGNRRKTDDCNEPAGKRKPSG
NGAQRRNPLAVKPRTRQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttgtctataatgagtgaaaagttacagaaggtgctagcgcgtgctggccaagggtctcgt
cgtgagatcgaattaatgattcaaagcggtcgtgtgagcattgacggcgtagtcgcgaaa
ttgggtgatcgtctagacgatttttctgttctcgtgcgtatcgatggtcacaagattgat
ctggtttcgccttctgaggaagtgtgtcgtgttcttgcttataacaaacctgaaggtgag
ttatgtacgcgtcacgatcctgaaggtcgccggactgtatttgatcgtttaccccgtcta
tcaagtggtcgttgggtttcggttggtcgattggatgcaaatacctcaggtctattgtta
tttaccactgatggtgaattagctaaccgcctgatgcacccaagccgaagtgttgaacgt
gaatacatggttcgcgttttcggtgagattaacgaaaatatggttaagaacctagttcaa
ggtgttgaactagaagatggtatggcacgtttcgaagacgttgtgtattctggcggcgaa
ggtatgaaccatactttctacgttgtgatcacagaaggccgtaaccgtgaagttcgtcgt
ttgtgggattcacaaggcgtaacagtaagtcgtctaaagcgtgtacgttatggtgatatc
tatctaacgaaagatatgcctcgtggcggttggatggagctcgagctgaaagaagttaac
tatcttcgtgaagtggtagagcttgaagctgaagaaaacacaatgttgacggtcgaaggc
ctgaagcgtaaacgtggtgttcgtcagattcgtcgtgccgtacgtcgtcacgaagaacgt
gttactgaaacacctcgtggtcgtcgtggtcgcacgaatacccctgatgaacgtcgttct
tcaacgcgtaacagtgaagctgaagggcaaaatgtaccagttgggaagcgtaagccgtca
ggtaagccttcaacggctaagccgacacgcggcaagccatctgctggtaagccagcgcaa
ggcaatcgtcgtaaaacagacgattgcaatgagccagcaggtaagcgtaaaccgtcaggt
aatggtgctcaacgtcgtaacccattagcggttaagccacgtacgcgtcaataa
DBGET
integrated database retrieval system