Photobacterium profundum: PBPRB1539
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Entry
PBPRB1539 CDS
T00173
Name
(GenBank) Hypothetical selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppr03012
]
PBPRB1539
Translation factors [BR:
ppr03012
]
Eukaryotic type
Elongation factors
PBPRB1539
Prokaryotic type
PBPRB1539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
SelB-wing_3
MMR_HSR1_Xtn
HTH_24
FeoC
eIF2_C
PduV-EutP
GTP_EFTU_D4
ANAPC2
Motif
Other DBs
NCBI-ProteinID:
CAG23402
UniProt:
Q6LH28
LinkDB
All DBs
Position
2:complement(1688615..1690339)
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AA seq
574 aa
AA seq
DB search
MTIDLGFAFFKHNNGEAVGVIDVPGHERFIRNMVAGVWSLDMVLFVVAADEGWMPMSTDH
LKVITAMGIDNVTLVITKSDLVDKDMLALVEEEALEQFLEIGGFIPDSLSVSAHQSLGIE
ALKHHICQKLDTLSRPVLDSSATALQDRHQKASQQKISQQQEGRLYIDRVFTVNGVGTTV
TGSLCGGEFHVGQKLVMQPSGTEVQVKSLQSYHQNIQTASPVSRVAIGLKGIKKKDVQRG
FCLLESKEGAFVANELIVRLDALPERGKCRNNSEVEVAFGTFNTLATIFVFKGTNLARLR
LKDPACCFWNQRLLLIQHGGSNIVNSGGILWTGAVPKLLRNKLYDLLMNLPESPEWRDYV
TLNMALYGYAKKGGLADKEQYQVCGEWLFTPECYQSSFEHIVATLEHEKIDLSVNELSGK
VQMSVPVLSDLLKQLVADGKLRQNDDLYSLGNGRNEAELSSIAKQILNKMVEAQKQGFEA
EKEKLPGAQKELRNLVRLGFAVPLEGKIYYEKNLYDSLVTGIIQGRQIDDRFDIAEAREC
AGLSRKYMIPVLNRMESDGWIKRDNNVRQVLRLQ
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgatctcggctttgctttttttaagcataacaatggtgaagcggttggggtt
attgatgttccgggtcatgaacgttttatccgaaacatggtagcaggcgtgtggagccta
gacatggtgctgtttgttgtggctgccgatgaaggctggatgccaatgtcgactgatcac
cttaaagttattaccgcaatggggatagacaatgtcacccttgtgataaccaagtctgat
ttagtcgataaagatatgctcgcgctagtggaagaagaagcgttagagcagtttttagaa
atcggtggttttattcccgattcactcagtgtgtcggcccatcaatctctgggtatcgaa
gcgcttaagcaccatatttgccaaaaattagacacgctttctcgcccagttttagattca
tcagctacagcgcttcaagatagacaccagaaagctagccagcagaaaataagtcagcaa
caagaagggcgcctctacattgaccgtgtatttaccgtaaatggtgtgggtacaacggta
acaggcagtttgtgtggtggtgaatttcatgtgggtcaaaaactggtgatgcaaccgtct
ggcactgaagtacaagtgaagagcttgcagtcatatcatcagaatatccaaactgcatca
cctgtttcacgtgtcgcgattggtttgaaagggatcaagaaaaaggatgtacaacgcggt
ttctgtttattggaatcgaaagaaggtgcctttgttgccaatgaactcattgttcggtta
gacgcactgcctgaacgcggaaaatgtcgaaataacagcgaagtggaagtcgcatttggt
acgtttaatacgttagccaccatctttgtgtttaaaggaacaaaccttgcgcggttacgc
ttaaaagaccccgcttgctgcttttggaatcaacgtttattgctgatccaacatggcggc
agcaatatcgtcaatagtggcggaattttatggacaggtgccgttcctaaactattgcgc
aataagctctatgacttactgatgaacttacctgaaagccctgagtggcgtgattatgtc
acactcaacatggcactttacgggtatgcgaaaaagggtggattagcagataaagagcaa
tatcaagtatgtggcgaatggctatttacccctgagtgctatcaaagcagtttcgagcat
attgtcgcgacccttgaacacgagaaaatcgatttatcggtaaatgaactcagtggtaaa
gtgcagatgtcagtgcctgttcttagtgacttgttaaagcaattagtcgccgatggtaag
ttaagacaaaatgacgatctgtactcactaggcaacgggcgcaatgaggcagaactttct
tctattgctaaacagatcttaaacaagatggttgaagcccaaaagcaaggctttgaagca
gaaaaagagaaattaccaggcgctcagaaagagctacgtaatctggttcgattaggtttt
gcagtgccactcgaaggtaaaatttattacgagaaaaacctatacgacagtttagtgacg
ggcattattcaaggtcgccaaattgatgatcgcttcgatattgcagaagcaagggagtgc
gcgggtttatccagaaagtacatgattccagtattgaatcggatggaatctgatggctgg
attaaacgtgacaacaacgtgcgccaagtacttcggttgcaatag
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