Photobacterium profundum: PBPRB1811
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Entry
PBPRB1811 CDS
T00173
Symbol
YPO4074
Name
(GenBank) hypothetical protein
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBPRB1811 (YPO4074)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRB1811 (YPO4074)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
PBPRB1811 (YPO4074)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PBPRB1811 (YPO4074)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
MIP-T3
Motif
Other DBs
NCBI-ProteinID:
CAG23669
UniProt:
Q6LGB1
LinkDB
All DBs
Position
2:complement(1976959..1977192)
Genome browser
AA seq
77 aa
AA seq
DB search
MWQFVDGRPVVNKWTTPEQVPAITEQSKAMSKFLKKKGFKFIGETICYALMQATGMVNDH
LVSCDCYEISKRIPKSL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
ttgtggcagtttgttgatggcaggccagtagtcaataaatggacaacaccagaacaagtg
cctgcgataacagagcaatcgaaagcaatgagcaagttcttgaagaaaaaaggctttaag
tttattggtgagactatctgttatgcgttaatgcaagcaactggcatggttaatgatcat
ttagtttcatgtgattgttatgaaatatcaaagcgtatacccaaatcactttaa
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