Pseudomonas protegens CHA0: PFLCHA0_c33010
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Entry
PFLCHA0_c33010 CDS
T02671
Symbol
acrD
Name
(GenBank) putative aminoglycoside efflux pump
KO
K18138
multidrug efflux pump
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc01501
beta-Lactam resistance
pprc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFLCHA0_c33010 (acrD)
01503 Cationic antimicrobial peptide (CAMP) resistance
PFLCHA0_c33010 (acrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprc02000
]
PFLCHA0_c33010 (acrD)
01504 Antimicrobial resistance genes [BR:
pprc01504
]
PFLCHA0_c33010 (acrD)
Transporters [BR:
pprc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PFLCHA0_c33010 (acrD)
Antimicrobial resistance genes [BR:
pprc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PFLCHA0_c33010 (acrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
VirD1
Motif
Other DBs
NCBI-ProteinID:
AGL85071
UniProt:
A0A2C9EN78
LinkDB
All DBs
Position
3695414..3698512
Genome browser
AA seq
1032 aa
AA seq
DB search
MPQFFIDRPVFAWVVAFFILLAGALAIPQLPVAQYPTVAPPQIEIYAAYPGASAQTLDES
VVSLIEQELNGADHLLYFSSQSSLGSATITATFQPGTNPELAQVDVQNRLKAVEPRLPQA
VTQQGLQVEKVSAGFLLLITLTSSDGRLNDVALSDYLARNVMNEIRRLDGVGKAQLYGAE
RAMRIWLDPQKLIGFNLTPADVNAAVAAQNAQVPAGSIGDLPNPASQEITATILVKGQLS
SPEEFADIVLRANPDGSTVRIGDVARVEVGSQEYQYGTRLNGKPSTAVGVQLSPGANALN
TATLIRAKMDELSRYFPAGVEYKIPYDTSPFVKVSITKVLYTLAEAMVLVFLVMFLFLQN
IRYTLIPTLVVPVALMGTFATMLALGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMA
SEGLSPKEATRKAMQQITGAIIGITLVLVAVFIPMAFMPGSVGVIYQQFSLSMATSILFS
AFLALTLTPALCATLLKPIAAGEHHERTGFFGWFNRRFERLSDSYQGGVTYALKRTGRYL
LIYLALLAIMALLFSRLPSSFLPVEDQGYTITDIQLPPGASQNRTIKVVEQIEAHNASEP
GVGDSTIILGFSFSGNGQNAALAFTTLKDWSQRGSEDSAMSIADRANAALGAIKDAVVYA
VLPPPIDGLGTSSGFEFRLQDRGGVGHAALMQARDELLKATEKSPILANVRESALAEAPQ
VQLEVDRKQANALGVSFADIGSLLSTALGSSYVNDFPNQGRMQRVVIQAEGDQRSQVEDL
LRLNVRNSAGKMVPLSAFVRASWSLGPAQLTRYNGYPAIAVSGEPAPGHSTGEAMQEIER
LVAQLPTGLGLEWTGLSLQERLSGSQAPMLLGLSLLIVFLCLAALYESWSIPTSVLLVVP
LGVLGAVLAVSLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKSLYDEGHDLIDATVQA
ARLRLRPIVMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVIFVPVFFVV
VMKLVKRGSSKD
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaattctttattgaccgcccggtattcgcctgggtggtcgccttcttcatcctg
ttggccggcgccctggcgatcccccaactgccggtggcgcaataccccaccgtggccccg
ccgcagatcgagatctacgccgcctacccgggcgcctcggcgcagaccctggacgaatcg
gtggtcagcctgatcgagcaggagctcaatggtgccgaccacctgctgtacttctcgtcc
cagagcagcctcggcagcgccaccatcaccgccaccttccagccgggtaccaacccggaa
ctggcccaggtggacgtgcagaaccgtctcaaggcggtggaaccgcgcctgccccaggcg
gtgacccagcagggcctgcaggtggagaaagtctccgccggcttcctcttgctgatcacc
ctgacctccagtgacggccgcctgaacgatgtcgccctcagcgactacctggcgcgcaac
gtgatgaacgagatccgccgcctcgatggcgtcggcaaggcccagttgtacggtgccgag
cgggccatgcggatctggctcgacccgcagaaactgatcggtttcaacctgaccccggcc
gacgtcaacgccgcggtggcggcgcagaacgcccaggttccggccggcagcatcggcgac
ctgcccaaccctgccagccaggaaatcaccgcgaccatcctggtcaagggccagctttcc
agccctgaagagtttgccgatatcgtcctgcgggccaaccccgacggctccacggtacgc
atcggcgatgtggcccgggtggaagtcggcagccaggaataccagtacggcacccgcctg
aacggcaagccgtccaccgcggtgggcgtgcagttgtcccccggggccaacgcgttgaat
accgcgaccttgatccgcgccaagatggacgagctgtcgcgctatttcccggccggcgtg
gaatacaagatcccctacgacacctcgcccttcgtcaaggtctcgatcaccaaggtgctc
tacaccctggccgaagccatggtgctggtgttcctggtgatgttcctgttcctgcagaac
atccgctacaccctgatccccaccctggtggtgcccgtggccctgatgggcaccttcgcc
accatgctggccctggggttctcgatcaacgtgctgaccatgttcggcatggtgctggcc
atcggcatcctggtggacgatgccatcgtggtggtggagaacgtcgagcggatcatggcc
tccgaaggcctgtcgcccaaggaagccacgcgcaaggcgatgcagcagatcaccggggcc
atcatcggcatcaccctggtgctggtggcggtgttcatccccatggccttcatgcccggc
tcggtgggggtgatctaccagcagttctcgctgtccatggccacctcgatcctgttctcg
gcgttcctcgccctgaccctgaccccggccctgtgcgccaccctgctcaagcccattgcg
gcgggcgaacaccatgaacgcacggggttcttcggctggttcaaccggcgcttcgaacgc
ctgagcgacagctatcagggcggcgtgacctatgccctcaagcgtaccggccgctacctg
ctgatctacctggcgctgctggcgatcatggcgctgctgttcagccgcctgccctcctcc
ttcctgccagtggaggaccagggctacaccatcaccgacatccagctgccacctggtgcc
agccagaaccgcacgatcaaggtggtggagcagatcgaagcgcacaacgccagcgaaccg
ggagtcggcgacagcaccatcattctcggcttcagcttctcgggtaacgggcagaacgcc
gcgctggccttcaccacgctcaaggactggtcgcaacggggcagcgaggattcggcgatg
tccatcgccgaccgcgccaacgccgccctcggcgcgatcaaggatgccgtggtgtacgcc
gtgctgccgccgccgatcgatggcctgggcacctccagcggctttgagttccgcctgcag
gaccgtggcggcgtcggccacgcggccctgatgcaggcccgggacgagctgctcaaggcc
acggaaaagagcccgatcctggccaacgtccgggaaagtgccctggccgaagcgccgcag
gtgcaactggaggtcgaccgcaagcaggccaacgccctgggcgtgtcctttgccgatatc
ggcagcctgctgtccaccgccctggggtcgtcctacgtcaacgacttccccaaccagggg
cggatgcagcgggtggtgatccaggccgaaggcgaccagcgcagccaggtcgaagacttg
ctgcgcctgaacgtgcgcaacagcgccggcaagatggtgccgctgtcggccttcgtccgc
gccagctggagcctgggccctgcgcaactgacccgctacaacggctacccggccattgcc
gtctccggcgagccggcccctggccacagtaccggtgaagccatgcaggaaatcgaacgg
ctggtggcgcagttgcccaccgggctgggcctggaatggaccggcctgtcactccaggaa
cggctgtccggcagccaggcgccgatgctgctgggcctgtcgctgctgatcgtgttcctg
tgcctggcggcgctctacgagagctggtcgattcccacctcggtgctgctggtggtgccc
ctgggggtactgggcgcagtgctggcggtgagcctgcgcggcatgcccaacgacgtgttc
ttcaaggtcggcctgatcaccatcatcggcctgtcagcgaagaacgcgatcctgatcatc
gagttcgccaagagcctgtacgacgaaggccatgatctgatcgatgccacggtgcaggct
gcacgcctgcgcctgcgccccatcgtcatgacctcgctggcgttcatcctcggcgtggtg
cccctggccatcgccaccggcgccagctccgccagccagcaggcgatcggtaccggggtg
atcggcggcatgatcaccgcaaccctggcagtgatcttcgtgccggtgttcttcgtggtg
gtgatgaaactggtgaaacgcggttcgtccaaggactga
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integrated database retrieval system
