Pseudomonas protegens CHA0: PFLCHA0_c35610
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Entry
PFLCHA0_c35610 CDS
T02671
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
pprc
Pseudomonas protegens CHA0
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
TIG
Ig_3
TIG_SUH
SprB
Motif
Other DBs
NCBI-ProteinID:
AGL85329
UniProt:
A0A2C9ENZ5
LinkDB
All DBs
Position
3982740..3986909
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AA seq
1389 aa
AA seq
DB search
MKTSRSSFHGSLARSLVLLFLLLSLPTAAMALLPPPVITSPGTGTTLPSVTVGQSMSIQI
LSSGGEMPLDKWYQCDIDDPDDTAPCLPPGLILDASPNSPTTTLHGAPTIAGNYTFNISL
NDGRNQAGVATYTLEVTGAATPTLTSVAPNSGSTAGATAVTLTGSNFTGATSVSFGGTAA
PSYTVNNATTITATTPAHAAGAVNVTIITPGGSATLTNGYTYAVPAPTVGPVSATVAANS
SANSITLSLSGGAATSVAVASAASHGTATASGTSISYTPTAGFSGTDSFTYTATNASGTS
SPATVTITVTPPTLAITPTTLPNGTQSTAYSQTLSTSAGTAPYSYAITAGSLPAGMSLNT
STGTLSGTPTAGGAFNLTITATDAYSATGSRAYTLLINGLPPVANALSTTVAANSSANTI
PLNITGGAATSVAVASAPSHGSATASGTSISYTPAAGFSGADSFTYTATNASGTSSPATV
SITVGAPSITLSPGSLSNGTAGTPYSATLNATGGAVPYSYSITSGSLPTGLSLNTGTGAI
SGIPSAAGTSNLTITATDTNGATGSQAYSITINIQAPVASAGSATVAANSSANPIPLSLS
GGAATSVAVASAASHGTATASGTSISYTPAAGFSGADSFTYTATNASGTSSPATVSITVS
APSITLSPGSLSNGTAGTPYSSTLSATGGTVPYSYSITSGSLPTGLSLNTGTGAISGIPS
AAGTFNLTITATDTNGATGSQAYSITINIQAPVASAVSATVAANSSANPIPLSLSGGAAT
SVAVASAASHGTATASGTSISYTPTAGFSGADSFTYTATNASGTSSPATVTITVSAPSLV
LTPASLGAGTAGSPYSATLSATGGTVPYSYSITSGSLPAGLSLNTASGLISGTPTTSGSS
NLVITATDANGATGSQAYSITIAAVAITVPASSQILAAGQSATVDLTQGATGGPFTHATL
GTVTPASAGRAMMMGPFSMRFVPSAAFAGTAVVSFGLHNLSGSSASSTMSFIIQTRADPT
RDAEVIGLLNAQTRAAERFASTQMDNFNQRMEQLHQMRCDRNSFNASLRKDGSNVPLGEV
AKVIKEQLGDSANQTEQEKREAAAAAQDNCKQDDLAFWSDGFVNTGSTHARGAQGNSFTT
LGLSAGVDYRLSPTLIAGVGIGYGNDRSEIGSNKTRSDADAIGIATYLSLNLAPQVFVDG
LLGYNRISFDSRRYITGSNDDYARGSRDADQLFASLTASYEYRQGPLSLTPYSRLNASVT
RLDAFSEKGGGIYGLSYDEQNQQNFTSYLGLRTGYDLMTRVGVVTPKVGLAWGHNFSSSS
DYKMRYTDQGDEGQLYRLKPDALDRDFASLDMGVDFNLGRAWQMGFSYKTALGSDERNDS
LRIGLNGKF
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcgcgcagtagtttccacggttcgctggcacgttcgctggtcctgcttttt
ctgcttttgagcctgccaacggccgccatggcgctgctgccgccccccgtgatcacaagt
ccggggacgggcaccacgctgccatcggtcacggtgggccagtcgatgagtatccagatc
ctttccagcggcggtgaaatgcccctggataagtggtaccagtgtgatatcgacgatcca
gacgatacggccccctgcctgccaccggggctgatcctcgatgcctcacccaacagtccg
accaccacgctgcatggtgcacctaccatcgccggcaactacaccttcaacatttccctg
aatgacggcagaaaccaggccggggtcgccacctataccctggaggttaccggcgcggcg
accccgaccctgacctcggttgcccccaactccggcagcaccgctggcgccaccgccgtc
accctcaccggcagcaattttaccggcgccacctcggtcagcttcggcggcacggcggcc
cccagttataccgtaaacaacgccacgaccatcacggccaccacaccggctcatgccgcg
ggcgcagtgaacgtaacgatcatcacccctggcggcagcgcgaccctgaccaatggctat
acctacgccgtgcccgcccccacagtcggcccggtcagcgccacggtggccgccaacagc
agcgccaactcgatcactctgagcctcagtggcggcgccgccaccagcgtcgccgtggcc
agcgccgccagccatgggactgccaccgccagcggcaccagcatcagctacacccccacc
gccggtttctccggcaccgacagcttcacctataccgccaccaacgccagcggcacttcc
agcccggctacggtgaccatcaccgtcaccccgcccaccctggcgataacaccgacgact
ctgcccaacggcactcaaagcacggcctacagccagaccctgagcacctccgcgggcacc
gccccctacagctacgcgatcactgccggcagcctgccggccggcatgagcctgaacacc
agcaccggtacactcagcggcacccccactgccggtggtgccttcaacctgaccatcacc
gccaccgacgcctacagcgccaccggctctcgcgcctacaccttgttgatcaacggcctg
ccaccagttgccaacgcactgagcaccacggtcgcggccaacagcagcgccaacacgatt
cccttgaacatcaccggtggtgccgccaccagcgtcgccgtggccagcgcccccagccat
ggcagcgccacggccagcggcaccagcatcagctacacgcctgccgccggtttctccggt
gccgacagtttcacctacaccgccaccaacgccagcggcacttccagcccggccacggtg
agcatcaccgtcggtgccccgagcatcaccctgagccccggctccctgagcaacggcacc
gccggcacgccctatagcgcaaccctcaacgccaccggcggcgctgtgccctacagctac
agcatcacatccggcagcctgccgaccggcctcagcctgaacaccggcaccggtgcgatc
agcggcataccgagcgccgctggcacctccaacctgaccatcaccgccaccgataccaac
ggcgccaccgggtcccaggcctactcgatcaccatcaatattcaggcaccggttgccagc
gccggcagcgccacggtcgcggccaacagcagcgccaacccgatccctctgagcctcagt
ggcggcgccgccaccagcgtcgccgtggccagcgccgccagccatgggactgccacggcc
agcggcaccagcatcagctacacccccgccgccggtttctccggcgccgacagtttcacc
tacaccgccaccaacgccagcggcacttccagcccggccacggtgagcattaccgtcagt
gccccgagcatcaccctgagccccggctccctgagcaacggcactgccggcacgccctat
agctcaaccctcagcgccaccggcggcactgtgccctacagctacagcatcacatccggc
agcctgccgaccggcctcagcctgaacaccggcaccggtgcgatcagcggcataccaagc
gccgctggcaccttcaacctgaccatcaccgccaccgataccaacggcgccaccgggtcc
caggcctactcgatcaccatcaatattcaggcaccggttgccagcgccgtcagcgccacg
gtcgcggccaacagcagcgccaacccgatccctctgagcctcagtggcggcgccgccacc
agcgtcgccgtggccagcgccgccagccacggtactgccacggccagcggcaccagcatc
agttacactcccaccgccggtttctccggcgctgacagcttcacctacaccgccaccaac
gccagcggcacttccagcccggccacggtgaccatcaccgtcagcgcgcccagcctggta
ctgaccccggcgtccctgggggccggcacggcaggcagcccctacagcgcaactctcagc
gccaccggtggcaccgttccctacagctacagcatcaccagcggtagcctgccggcgggc
ctgagcctgaacaccgccagcggcctgatcagcggtacgccgactaccagcggcagcagc
aacctggtcatcaccgccaccgatgccaacggtgccacgggctcacaggcctattcgatc
accatcgctgccgtggcgatcaccgtgcccgcctccagccagatcctcgcagcgggccag
tcggccaccgtcgacctgacccagggcgccaccggcggcccgttcacccacgccaccctg
ggcacggtgaccccggcctcggccggccgggcgatgatgatgggccccttctcgatgcgc
ttcgtgccatcggcggccttcgccggtacggcggtcgtcagcttcggcctgcacaacctc
agcggctccagcgcctccagcaccatgagcttcatcatccagacccgtgcggacccgacc
agggacgccgaggtcatcggcctgctcaacgcccagacccgcgccgcggaacgctttgcc
agtacccagatggacaacttcaaccagcgtatggagcagttgcaccagatgcgctgcgac
cgcaattcgttcaacgccagtttgcgcaaggacggcagcaacgtaccgctgggcgaggtc
gccaaggtgatcaaggaacaactgggagattcggccaaccagaccgagcaggaaaaacgc
gaggccgccgctgccgcgcaggacaactgcaagcaggatgacctggcgttctggagcgac
ggtttcgtcaacaccggctcgacccacgcccgtggcgcccagggcaacagtttcaccacc
ctgggcctgagcgccggcgtcgactatcggctgtcgcccacgctgatcgccggggtcggg
atcggctacggcaacgaccgcagcgagatcggcagcaacaagacccgcagcgatgcggac
gccatcggcatcgccacctacctgagcctgaacctggcgccccaggtgtttgtcgacggc
ctgctgggctacaaccgcatcagcttcgactcgcgtcgctacatcacgggcagcaacgac
gactatgcccgaggctcgcgcgatgccgaccagttgttcgcctcgctgaccgccagctac
gagtaccgccaggggccactgtcgctgaccccctacagccgcttgaacgccagcgtcaca
cgcctggacgccttcagtgaaaaaggcggaggcatctacgggctttcctatgacgagcaa
aaccagcagaacttcacttcctacctgggcctgcgcaccggttacgacctgatgacccgg
gtcggcgtggtcacccccaaggtcggcctggcctggggtcacaacttcagtagcagcagc
gactacaagatgcgctataccgaccagggcgatgaaggccagctctaccggctcaagccc
gacgccctggaccgcgacttcgccagcctggacatgggtgttgacttcaacctcgggcgt
gcctggcaaatgggcttctcctataagaccgcgctgggttcggatgaacgcaacgacagc
ctgcgcatcggtttgaacgggaagttctag
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