Pseudodesulfovibrio profundus: DPRO_1054
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Entry
DPRO_1054 CDS
T05258
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf03030
DNA replication
pprf03430
Mismatch repair
pprf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPRO_1054 (ssb)
03430 Mismatch repair
DPRO_1054 (ssb)
03440 Homologous recombination
DPRO_1054 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprf03032
]
DPRO_1054 (ssb)
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_1054 (ssb)
03029 Mitochondrial biogenesis [BR:
pprf03029
]
DPRO_1054 (ssb)
DNA replication proteins [BR:
pprf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DPRO_1054 (ssb)
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DPRO_1054 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
DPRO_1054 (ssb)
Mitochondrial biogenesis [BR:
pprf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
DPRO_1054 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SOB57942
UniProt:
A0A2C8F7Y0
LinkDB
All DBs
Position
DPRO:complement(1071016..1071579)
Genome browser
AA seq
187 aa
AA seq
DB search
MAGSLNKVILIGRLGRDPELSYTPNGQARAKFSVATDEGYRDRQTGQRVEKTEWHNVVAW
RQTAEFCGNYLGKGRLVMVEGKLQTRKWQDQSTGQDRYMTEIVADNVQGLDRAPDGQFNQ
AGQQPQGGYQQNNQQQGQQNGGYQQNYQQPQGQQGQPQQGQQPQQGQQEDLGPAFPSEAS
GMDDVPF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagtttaaataaagtcattttgatcggcagactgggacgtgatcccgagttg
tcatatacgcccaacggacaggcccgtgcgaaattttccgttgccacagacgaaggttac
cgcgacaggcagactggccagcgtgtagaaaagaccgagtggcacaacgttgtcgcatgg
cgtcagactgcggaattctgcggcaactatcttggcaagggccgtcttgtcatggttgaa
ggaaaactgcagacacgcaagtggcaggatcagagcaccggacaggatcgctatatgact
gagatcgtcgctgacaatgttcagggtcttgatcgtgctcctgatggtcagttcaatcag
gctggtcagcagccccagggcggataccagcagaataaccagcagcagggccagcaaaac
ggtggctaccagcagaattatcagcagccccagggccagcaaggtcagccgcagcagggg
cagcagcctcagcagggccagcaggaagatcttggtcccgcattcccctcagaagccagc
ggaatggacgacgtgccgttctga
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integrated database retrieval system
