Pseudomonas promysalinigenes: HU725_001225
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Entry
HU725_001225 CDS
T07662
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg00521
Streptomycin biosynthesis
pprg00523
Polyketide sugar unit biosynthesis
pprg00541
O-Antigen nucleotide sugar biosynthesis
pprg01100
Metabolic pathways
pprg01110
Biosynthesis of secondary metabolites
pprg01250
Biosynthesis of nucleotide sugars
Module
pprg_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HU725_001225 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU725_001225 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU725_001225 (rfbC)
Enzymes [BR:
pprg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HU725_001225 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QXI34026
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All DBs
Position
complement(269610..270152)
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AA seq
180 aa
AA seq
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MNIIATEIPDVVIIEPKVFGDSRGFFFESFNAREFKKQTGFDGHFVQDNHSRSQRGVLRG
MHYQIDNPQGKLVRVVQGEVLDVAVDIRRSSPTFGRWVARRLNATDHLQFWIPPGFAHGF
LVLSESADFLYKTTDYYNPAAERSIRWDDPDLGIDWGVANPTLSAKDQAAVLLKNADLFP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatagcgaccgaaatacccgacgtagtcatcattgaaccgaaggtcttcggc
gacagccgtggctttttcttcgaaagcttcaatgctcgcgaattcaagaagcagaccggc
ttcgatggccacttcgtccaggacaaccactcccgctcccaacgcggcgtgctgcggggc
atgcattatcaaatcgataacccgcaaggcaaactggtgcgcgtggtgcaaggcgaagtg
ctggacgtagccgtagacatccgccgcagttcgcccaccttcggccgctgggttgcacgg
cgcctgaatgccaccgaccatttgcagttctggattccgccggggttcgcccacggcttt
ctggtgctgagtgagtcagcggatttcctgtacaagaccaccgactactacaaccccgcc
gccgagcgctcgatccgctgggatgaccctgacctgggcatcgactggggggtcgcgaac
ccgaccctgtccgccaaggaccaagctgccgtactgttgaagaacgccgacctgttccca
tga
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