Poeciliopsis prolifica (blackstripe livebearer): 129351378
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Entry
129351378 CDS
T09758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129351378
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129351378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
ANCHR-like_BBOX
U-box
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_10
zf-RING_6
OrfB_IS605
DIRC1
MAP65_ASE1
Nup88
MRP-S31
Motif
Other DBs
NCBI-GeneID:
129351378
NCBI-ProteinID:
XP_054876226
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MRTETIPRKKNSKSLLRAEMEKRGFQQDNISCSFCLEILKDPVTIPCGHSYCRNCINYHW
DREDQRRKYSCPECRKEFIPRPALVKNITLAKMVMDLKKTEHKAAPPIDCYVEPENVACD
VCTGRKRKAVKSCLSCPASYCENHLQPHHDAPPLKKHKLVNPSKNLQNNICSRHDEVMKI
FCRTDQQSICYLCTMDEHKGHETVPAAAEMDEKQKKLQESRQQILQRIQDQEKDVNLLQQ
KVEAINVSADKAVEDSEKIFTELIRLLQERSSDVKQQIRSQQETEVSRVKDVQEKLQQEI
TELKRKNAELEQLSHTEDHTQFLLNYPSLPALSESTGSSRINIRPLRHFEDVTAAVSELR
DKLQKILKDTWRRISLRVTMMIVALPEPKIRVEFFRCSQKITLDANSANRLLLLSEGNRK
VTRMNQQQFYPDHPHRFTVWPQILSTENLPGRCYWEVDWSGGSVNIAVSYKNISRSGRSD
GCSFGFNDKSWSLRCNRNSCTFWHNKSQTPVPGPVSSRVGVYLDHRAGILRFYNVSGTIS
LLHRVQTRFIQPLHAGIRLSEGSSAEFVKPK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactgaaactattccaaggaaaaaaaactcaaagtcattactgagagcagaaatg
gagaagagaggatttcagcaggataatatctcttgttccttctgcttggagatactgaag
gatccagtgactattccctgtggacacagctactgtaggaactgtattaactaccactgg
gatagagaagatcagaggagaaaatacagctgccctgaatgcaggaaagagttcatacca
agacctgccctggtgaagaacatcacattagcaaagatggtgatggatctaaagaagact
gaacataaagctgctccacctattgactgctatgttgaacctgaaaatgtggcctgtgat
gtctgtactgggaggaagagaaaagctgtcaagtcctgtttatcatgtccagcttcttac
tgtgagaatcacctccaacctcaccatgatgctccaccattgaagaaacacaagctggtg
aatccatccaagaatctccagaacaacatctgctctcgtcatgatgaggtgatgaagatc
ttctgtcgtactgatcagcagagtatctgttatctctgcactatggatgaacataaaggc
catgaaacagtcccagctgcagcagaaatggatgagaagcagaagaagctccaggagagt
cgacaacaaatccttcagagaatccaggaccaagagaaagatgtgaatctgcttcaacag
aaggtggaggccatcaatgtctctgctgataaagcagtggaggacagtgagaagatcttc
actgagctgatccgtctcctccaggaaagaagctctgatgtgaagcagcagatcagatcc
cagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctgcagcaggagatc
actgagctgaagaggaaaaacgctgagctggagcagctctcacacacagaggatcacacc
cagtttctcctcaactacccctcactgccagcactcagtgagtctacaggatcatccagg
atcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctcaga
gacaagctacagaaaattttgaaagacacatggagaagaatttcactgagagtcacaatg
atgatcgttgcattgccagaaccaaagatcagagttgagttcttcaggtgttcacaaaaa
atcactctggatgcaaattcagcaaatagattactgttattatctgagggtaatagaaaa
gtaacaagaatgaaccaacagcagttttatcctgatcatccacacagattcactgtttgg
cctcagatcctgagtacagagaatctgcctggacgttgttactgggaggtggattggagc
ggaggaagcgttaatatcgcagtatcatacaagaacatcagcagatcaggacgctcagat
ggatgttcatttggattcaatgacaaatcttggtcactgcgctgtaacagaaatagttgt
acattttggcacaacaaaagtcaaactccagtaccaggtccagtttcctcccgagtcgga
gtgtatctggaccacagagcaggtattctgcgtttctacaacgtctctggaaccatcagt
ctcctccacagagtccagaccagattcattcagcctctgcatgctgggattagactttct
gaaggatcatctgctgagtttgttaaacctaaatag
DBGET
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