Poeciliopsis prolifica (blackstripe livebearer): 129351709
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Entry
129351709 CDS
T09758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129351709
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129351709
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Perilipin
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
129351709
NCBI-ProteinID:
XP_054876612
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MEQNKLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKRHWNVEDLKRIYSCPQCREKFS
PRPALKKNVVFATVVEDLKNTGLQAAPADHRYAGPKDVACDFCTGTKLKATKSCLVCLAS
YCEKHLQPHYNSDTFKQHHLVEPTKNLKKNICSKHDHVMKIFCRTDQKCICSFCLMDEHQ
GHNTVSASVEWTERQRELKKRRGSIKQRLQVREEDVKLLQQEVEDINHSADKAVEECEEI
FTELIRLLQKRSSDVKQQIRFQQETEVRQVKDVQEKLQQEITELKRKNAELKELSKIEDH
NQFLCGYSSMPVFSESTNSSSININPLRYFEDILASVSELQVELQDILRDPWRGSLLSLT
EVNVSLSEQEPKSRAGFLRHSKDLTLNPNTANVWLALSKEDRKVKRMGEPQFLSRHAERF
THWRQVLSRESLTGCCYWEVERKGRIYVAVAYNSIIRAGRSNKSLFGANDKSWALECRSH
NFKFGHNDIWKSISGPVSSRVGVYLDHRAGILSFYRVSESMTLIHRVQTTFTEPLHAGLW
IGFACHAELCEPK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaataaactggaccgagaaactttctcctgttcgatctgcctggatctactg
aaggatccggtgacgattccctgtggacacagttactgtatgaactgcattaaaagacac
tggaatgtggaggatctgaagagaatatacagctgccctcagtgccgggagaaattctct
ccaaggcctgctctgaagaaaaacgttgtttttgcaactgtagtggaggacctgaagaac
actggactccaagctgctcctgctgaccaccgctatgctggacctaaagatgtggcctgt
gatttctgcactggaacaaaactgaaagccaccaagtcctgtttagtctgtctggcctct
tactgtgagaaacaccttcagcctcattataattctgacacatttaagcaacaccacctg
gtggagcccaccaagaatctcaagaagaacatctgctctaaacatgatcatgtaatgaag
atattctgccgcactgaccagaagtgcatctgtagcttctgtttaatggatgagcatcaa
gggcacaacacagtgtcagcttcagtcgaatggactgagaggcagagagagctgaagaag
agacgaggaagcatcaagcagcgattgcaggtcagagaggaagatgtgaagctgcttcag
caggaggtggaggacatcaatcactctgctgataaagcagtggaggaatgtgaggagatc
ttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcaga
ttccagcaggaaactgaagtgcgtcaagtcaaagatgttcaggagaagctgcagcaggag
atcactgagctgaagaggaaaaacgctgagctgaaggagctctcaaagatagaggatcac
aaccagtttctctgcggttacagctcaatgccagtatttagtgaatccacaaactcatcc
agcatcaatattaatcctctgagatactttgaggacatcttagcgtctgtgtcagagctc
caagttgaactgcaggacatcctgagagacccgtggagaggaagcttactgagtctcact
gaggtgaatgtttcactgtcagaacaagaaccaaaaagcagagctggatttttaagacat
tcaaaggacctcacactaaatccaaacactgcaaatgtatggctggcactatcaaaagag
gacagaaaggtgaaaaggatgggtgagcctcagtttctttctcgtcacgcagaaagattc
actcattggcgtcaggttctgagtagagaaagtctgactggatgttgttactgggaggtg
gagaggaaagggagaatttatgtagccgtcgcttacaacagtatcatcagagcaggaaga
agtaataaaagtttatttggagctaatgacaaatcatgggcattagaatgtcgttcacac
aattttaaatttggtcataatgacatctggaaatccatctccggtccagtttcctccaga
gtgggagtgtacctggatcacagagcaggtatcctgtccttctacagagtctctgaatcc
atgactctgatccacagagtccagaccacattcactgagccgctacatgctgggctttgg
attggttttgcatgtcatgcagagctctgtgaacccaaatag
DBGET
integrated database retrieval system