Poeciliopsis prolifica (blackstripe livebearer): 129351737
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Entry
129351737 CDS
T09758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129351737
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129351737
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
Exonuc_VII_L
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
129351737
NCBI-ProteinID:
XP_054876627
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MEPQAVQLDRESFSCPICLDLLKDPATIPCGHSYCMNCINTHWDEQHKKGIYSCPQCRKT
FISRPVLEKNTMLATLVEQLKKTGLQAAPTDHRYAGPEDVACDSCTGRKLKAIKSCLVCL
ASYCEKHLQPHHYSSTFRYHKLVEPTKNLQENICSKHDEVINMFCRTDKKCICYLCSVDE
HKGHDTVSAAAERTERQRELEERRGNIQQRIQDREKDVKLLQQEVEAINHSADKTVEDSE
EIFTQLIRLLQKRSSDVKQQIRSQQETEVSRVKDVEEKLQQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSSSINIRPLRHFEDVAAAVSELRDKLQDVLKIRKVDVLLS
EPMNKSDFLRYACKITLDPNSAHTHLVLSEENRKVTLMNQPQSYPSHPDRFTGCCQVLSK
ESLTGRCYWEVEWRGRGGFVAVSYNNISRAGGGNECGFGRNHKSWALDCYQKKYAFFHKN
IKTPVSGPVSSRVGVYLDHTAGILSFYSVSGSMTLIHRVQTRFTEPLHAGVWIYYSKDAV
EFCKLR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcaggcagttcagctggaccgagaatctttttcatgtccgatctgtttggat
ctactgaaggatccggcgacgattccctgtggacacagctactgtatgaactgtattaac
acccactgggatgaacagcataagaaaggtatttacagctgccctcagtgcaggaaaacc
ttcatatcaaggcctgtcctagagaaaaacaccatgttagcaacgttagtggagcaactg
aagaagactggactccaagctgctcctactgaccatcgctatgctggacctgaagatgtg
gcctgtgattcctgtactggaagaaaactgaaagccatcaagtcctgtttagtttgtctg
gcctcttactgtgagaaacaccttcagcctcatcattattcatcaactttcaggtaccac
aagctggtggagccgaccaagaacctgcaggagaacatctgctctaagcatgatgaggtg
ataaacatgttctgccgcactgataagaagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtatcagctgcagcagaaaggactgagaggcagagagagctg
gaggagagacgaggaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcagcaggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgag
gagatcttcacccagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttgaggagaagctgcag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtccacacac
tcatccagcatcaacatccgtcctctgagacactttgaggacgtggcagcagctgtgtca
gagctcagagacaaactgcaggacgtcctgaaaatcaggaaggtggatgttctactgtca
gaaccaatgaacaaatctgactttttaagatatgcatgtaaaatcacattggatccaaac
tcggctcacacacatctggttttatcagaagagaacaggaaggtgacattgatgaatcaa
cctcagtcttatccaagtcatccagacagattcactggttgttgtcaggtcctgagtaaa
gagagtcttactggacgttgttactgggaggtggagtggagaggaagaggaggatttgtt
gctgtttcatacaataatatcagcagagcaggaggtgggaatgaatgtggatttggtcgg
aatcacaagtcttgggctttggattgttaccagaaaaaatatgcattttttcacaagaac
atcaaaactcctgtctcaggtccagtttcctccagagtgggagtgtacctggatcacaca
gcaggtattctgtccttctacagcgtctctggatccatgactctgatccacagagtccag
accagattcactgagccgcttcatgctggagtttggatttattactccaaagatgctgta
gagttctgtaaacttaggtag
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integrated database retrieval system
