Poeciliopsis prolifica (blackstripe livebearer): 129352625
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Entry
129352625 CDS
T09758
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129352625 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129352625 (herc4)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129352625 (herc4)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
HECT type E3
129352625 (herc4)
BRITE hierarchy
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129352625
NCBI-ProteinID:
XP_054877679
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRRCEFFHGKRVSDVGCGRRHTAFLLDDGTVYTCGC
NDLGQLGHDKTRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNN
FEECIRVPRNIKSLSDVQVAHVACGFWHSLALSRGGQIFSWGQNRYGQLGLGLTGQGVST
PQAVQSLQAIPFAQLAAGGAHSFALTLSGAVFGWGRNKFGQLGVNDTNDRCFPTLLKSLR
SQRVIYVCCGEDHTAVLTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNVVTQIS
CGRQHTLAFTPACGKIYSFGLGGNGQLGTRATCNRKSPSPVKGPWATSGPSQENDSEQSC
LIKRIYAGGDQSFAHYCSTYEPQDMYNLTVQNPQRRICTLNEEIIQKWLNNSPGRLPVDV
SNEIDLLFSSASCLNGSFLSTSHPGHFSTSSKYSGVDMNMARLLLHRLIQQDHPKISQQV
AASLEKELIPKLSSSPPDIEALRLYLSLPESPLFSDRSNYITITIPFAKCVVGLKEAPLK
VLGNWWSTFEPLFFQRLVDLYKDVVVFLLQMHKMGIPPAEQRIFTCFMDTSLRFLEILHK
VNEKSGSIIQYDKFYIHELDDLIDIRNDYVTWIQRQMYPMGRDGVVTLCKYPFVFDAQAK
TALLQTDAVIQMQMAVDQAQLQNFSSMFLPAVESVNPCLILIVRRENIVGDTMEVLRKSK
NVDYKKPLKVVFVGEDAVDAGGVRKEFFLLIMKELLDPKYGMFRYYEESRLIWFSHKTFE
DFDLFNLIGVICGLAIYNFTIVELNFPLGLYKKLLKRKPTLEDLKELMPDVGRSLQELLD
YTEDDIEDTFCLNFTITEDNYGATEVLELVPNGGNINVNKSNRQEFVDAYIDYVFNKSVA
PLFEGFFSGFHKVCGGRVLDLFQPSELQAMIIGNTSYDWTELEKSTEYKGEYWAEHPTIK
LFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTSGGEQYLPVAHTCFNLLD
LPKYSSIETLREKLLHAIDHNQGFNLA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggggaaacgcctcctacggacagctgggtctgggcgggatcgacgaggag
attgtagttgagccgcggaggtgtgagttttttcacgggaagcgagtgagcgacgttggc
tgcggccgcagacacacggccttcctgctggacgatgggaccgtctacacctgcggctgc
aacgacctgggccagctgggtcacgacaagaccaggaagaaaccagagcaggtcgtggcc
ttggacgcacagattatcgtggcgttgtcctgcggagagtcgcacacgctggccttaaac
gacaaaggccaggttttctcctgggggctcggctcagacggacaactgggtctaaataac
tttgaagaatgtattcgagttccgaggaatatcaagagtttatcagatgtacaggtcgcc
cacgttgcttgtgggttctggcactccctcgctctctccagaggcggacagatcttctcc
tggggtcagaaccgatacggccagctggggctgggcctgacgggtcagggcgtctccacg
cctcaggccgtccagtcgctccaggccattcccttcgctcagctggcagcaggtggcgct
cacagcttcgccctcactctctctggtgctgtgttcggctggggccgcaacaagttcggc
cagctgggggtcaacgacaccaacgatcgctgcttcccaactctcctcaagtctctgaga
tcccagagagtgatctacgtctgctgtggagaagatcacacggccgtgctcacaaaggaa
gggggtgtgtttacgtttggcgcaggagggtacggacagctcggccataactccaccaac
catgaaatcaaccccaggaaggtgtttgagctcatgggaaatgtagtcactcagatttca
tgtggcaggcagcacacgctggccttcacacccgcttgtgggaagatctactcgtttgga
ctgggagggaacggccagctgggcacgcgcgctacctgcaacaggaagagcccctcacct
gtcaaaggaccctgggccacttccggtccctcgcaggagaacgactcggagcagagctgc
ttgatcaaaaggatttacgctggaggagatcagagctttgctcattattgcagcacttat
gaacctcaggacatgtacaatttgacagtacaaaatcctcaaagaaggatttgcaccctg
aatgaggagattatacagaaatggctgaacaactcaccaggaagactcccagtcgacgtg
tccaatgagatcgacctgctgttctcctctgccagctgcctgaacggctcgtttctgtcc
accagtcatccgggtcacttcagtaccagcagtaaatattctggcgtggacatgaacatg
gctcggctgcttctccacagactgatccagcaggaccacccaaagatttctcagcaggtt
gctgccagtctggagaaggagctgattcccaaactgagcagctctcctccagacatcgag
gcgttgaggctctacctgtcgctgcctgaaagccccctgttcagcgaccgcagcaactac
atcaccatcaccatcccctttgccaaatgcgtcgtcggcctgaaggaggcgccgctgaag
gttttagggaactggtggtccacattcgagccgctgttcttccagcggctggtcgacctc
tacaaggacgtcgtcgtgtttctgctgcagatgcataaaatgggcattcctccggcggag
cagcggatcttcacctgcttcatggacacttcgctccggttcctggagattctgcacaag
gtgaacgagaaatcaggaagcatcatccagtacgacaagttctacatccacgagctggac
gacctgatcgacatcaggaacgactacgtcacctggattcagcggcagatgtaccccatg
ggccgcgacggtgtggtgactctctgcaagtatcccttcgtcttcgacgctcaggcgaag
acggcgttacttcagacagatgccgtcatacagatgcagatggcggtggatcaggcgcag
ctgcagaacttcagctccatgttcctgcccgctgtggagtcggtcaacccctgcctcatc
ctcatcgttcgcagggagaacatcgtgggcgacaccatggaggtcctcaggaagtccaag
aacgtcgactacaagaaaccactgaaggtggtgtttgtgggagaagatgcggttgatgct
ggaggtgtcaggaaagagttcttcctcctgatcatgaaggagctgctggatcccaaatat
gggatgtttcgctactacgaggaatccagactcatctggttttcacacaagacgttcgag
gactttgacctgtttaacctcattggggtcatctgtggtctggccatctacaacttcacc
atcgtagagctcaacttccctctggggctttacaaaaagctcctgaagaggaaaccaacg
ttggaagacctgaaggagctcatgccagacgtgggaaggagcctgcaggaactactggac
tacactgaagatgacattgaagacactttctgcttgaatttcactatcacagaggataac
tacggagccactgaagtcctggagttggtaccaaacggtggaaacattaatgtcaataag
tcaaaccggcaggagtttgtggacgcctacattgattacgtctttaacaagtcggtggct
ccgctgtttgagggattcttctcaggtttccacaaagtgtgcggtgggagggttttagat
ctgttccagccgagcgaactgcaagctatgatcattggcaacaccagctacgactggaca
gaactggagaagagcactgaatataaaggagaatactgggccgaacatccaaccataaag
ctcttctgggaggtcttccacgaacttccgttggagaagaagaaacagtttctattgttc
ctcacaggaagcgaccgcatccccatcctgggcatgaaaagcctgaagctggtgatccag
ccgaccagcggaggcgagcaatacctgcctgttgcccacacctgcttcaacctgttggac
cttcccaagtactccagtatagaaacgctgagagagaagcttttacatgcgatagatcac
aatcaaggcttcaacctggcctga
DBGET
integrated database retrieval system
