Poeciliopsis prolifica (blackstripe livebearer): 129352693
Help
Entry
129352693 CDS
T09758
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129352693
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129352693
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Exonuc_VII_L
AAA_23
Motif
Other DBs
NCBI-GeneID:
129352693
NCBI-ProteinID:
XP_054877783
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MEQNQLDQETFSCSICLDLLKDPVTIPCGHSYCMNCIKSHWDKEDQKGIHSCPQCRETFT
PKPALKKSTVLGALVEQLKKTELQAAPADHCYAGPEDVACDFCTERKLKAIKSCLVCLAS
YCKNHLQSHLDVPGLKNHKLVEPNKNLHENICSKHDKLLEIFCRTDQKCICSFCLLDEHK
GHDTVSAAAERAERQRELEERRGNIQQRIQDREKDVKLLQQEVEAISHSADKTVEDSEEI
FTQLIRLLQERSSDVKQQIRSQQETEVSRVKDVEEKLQQEITELKRKDAELEQLSHTEDH
NQFLLNYPSLPALSESTHSSSINIRPLRHFEDVAAAVSELRDKLQDVLRDSWTNISLMVT
EVDVLLSEPEPKSRADFLRYSCQITLDPNTAHKKLVLSEGNRKVTAMGQPQSYPSHPERF
TDYWQVLSKERLTGRCYWEVKWRGRVFVAVAYKSISRAGGGNECGFGGNDKSWAVNCYLD
GYQFGHNIWTSISSLVSSRVGVYLDHRAGILSFYSVSGSMTLIHRVQTRFTEPLHAGVWF
RWTGDAVEFCKPK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctggaccaggaaactttctcctgttcaatctgtctggatctactg
aaggatccggtgacgattccctgtggacacagctactgcatgaactgtattaagtcccac
tgggataaagaggatcagaaaggaatccacagctgccctcagtgcagggagacattcaca
ccaaagcctgcactgaagaagagcaccgtgctaggagctttagtggagcagctgaagaag
actgaactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcctgt
gatttctgcactgaaagaaaactgaaagccatcaagtcttgtttagtctgtctggcctct
tactgtaagaatcacctccaatctcaccttgatgtccctggactaaagaatcacaagctg
gtggagccgaacaagaacctccatgagaacatctgctctaaacatgataagctgttggag
atcttctgccgcactgatcagaagtgtatctgtagtttctgtttactagatgaacataaa
ggccatgacacagtgtcagctgcagcagaaagagctgagaggcagagagagctggaggag
agacgaggaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaa
caggaggtggaggccatcagtcactctgctgataaaacagtggaggacagtgaggagatc
ttcacccagctgatccgtctcctccaggaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagatgttgaggagaagctgcagcaggag
atcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcac
aaccagtttctcctcaactacccctcactgccagcactcagtgagtccacacactcatcc
agcatcaacatccgtcctctgagacactttgaggacgtggcagcagctgtgtcagagctc
agagacaaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcact
gaggtggatgttctgctgtcagaaccagaaccaaagagcagagctgatttcttaagatat
tcatgtcaaatcacattggatccaaacacagctcacaaaaagctggttctgtcagaaggg
aacaggaaggtgacagcgatgggtcaacctcagtcttatccaagtcatccagaaagattc
actgattactggcaggttctgagtaaagagagactaactggtcgttgttactgggaggtg
aagtggagagggagagtttttgtagccgtcgcgtataaaagtatcagcagagccggaggt
gggaatgaatgtggatttggaggcaatgacaaatcctgggctgtaaattgttacttagat
ggttatcaatttggtcacaacatctggacctccatctcaagtttagtttcctccagagtg
ggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctggatccatg
actctgatccacagagtccagaccagattcactgagccgcttcatgctggagtttggttt
cgctggacaggagacgctgtagagttctgtaaacccaagtag
DBGET
integrated database retrieval system