Poeciliopsis prolifica (blackstripe livebearer): 129364405
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Entry
129364405 CDS
T09758
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129364405 (sox6)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129364405 (sox6)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129364405
NCBI-ProteinID:
XP_054892979
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMSQEHLSWEKDESAEAHGTPQLPLHSL
LHGKAPDEMQPLSSVPPESDWDSLVSAQQRMEPDSNKVCSLYSFRNTSTSPHKPEEGARE
RSDMLSGSAFGTPERRKGSLADVVDSLKQKKLEEMTKTEQDESSCMEKLLSKDWKEKMER
LNTSELLAEVKGTPEGLAEKEHQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQM
ELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQ
QGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPP
LPQPINTSGPISPSSLKNDKSSSSPITQVKEEGTQPLNLSARPKTTEMVKSPTSPTSNLF
PGSKSSPNSLIGKGGIPSPLGGGLGRDILSTLNSTALFGDQDTVMKAIQEARKMREQIQR
EQLQHHQQGIDAKLSALSSVGLNHCRVDKERVHFDSIGHHLGKLGEEGKIGHRVIDLTRP
EDLDGSKAVNGSADKPEPYYCWPTGGAGSNEARVFRESRGRNNNEPHIKRPMNAFMVWAK
DERRKILQAFPDMHNSNISKILGSRWKAMSNQDKQPYYEEQARLSKLHLEKYPNYKYKPR
PKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQPPQIPITTSTSMVYPGGLTMANTT
PSPQMTSECSSASVSPEPSIPVIQSTYNMKLEPSAMVNNSEPVNGEDEMDMYEDFEDEPK
SDYSSENDTQEPVSAN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttcttcgtagcagctttttactgagcagagtcatgtcttctaagcaagcc
acatcaccttttgcgtctgtggttgacggtgacgatgctatgagtcaggagcacttgtct
tgggagaaagatgaaagcgcagaggcccacggcacacctcagctgcccctgcacagtctg
ctccatggcaaagccccagatgaaatgcagccgctcagcagcgtgccaccagagagtgac
tgggacagcctggtgtcagcacagcagcgcatggaacctgacagcaataaagtatgttcc
ctgtactccttccggaacacttccacttctccacacaaacctgaggagggggcccgggag
cggagtgacatgctgagcggatcagcattcgggactccggagcgccgcaaaggaagcctg
gcagacgttgtggactcgctgaagcaaaagaagctggaggagatgacaaagacagagcaa
gatgaatcttcatgcatggagaaacttctttctaaagactggaaagagaagatggagagg
ctcaacaccagtgagttactggcagaagttaaaggtaccccagagggtctggcagaaaag
gagcaccagctctccacaatgataacccagttgataagtctgcgagagcaactcctggct
gcccacgatgagcagaagaagcttgctgcttcacagatggagaaacagaggcagcaaatg
gagttggctcgacagcagcaggagcagattgcacgacaacaacagcagcttctgcaacag
cagcacaaaatcaacctccttcagcagcagatccagcaggtccagggtcacatgcctccg
ctcatgatccccatctttccacacgaccaacgcactctagcagcagcagctgccgcccag
caaggctttctcttccctcctggaatgtcttacaagccaggtgataactacccagtgcag
ttcattccatccacaatggcagctgcagcagcgtcaggactcagccccctccagctccag
caactgtacgccgcccagcttgccagcatgcaggtgtctcctggagccaaaatgcctcct
ctaccacaacccatcaacactagtgggcccatctctccttcgtctctgaagaacgacaaa
agttcttcaagccccatcactcaagtaaaggaggagggaacacagcccctcaacctgtct
gctcggccaaagacgacagaaatggtcaaatctccgacatccccaacatcaaacctgttc
ccaggcagtaaaagcagccctaacagtctcattggcaaaggcgggatccccagcccgctt
ggaggaggcctcggccgggacattctgtccactctaaactccaccgcattgtttggggac
caggacacagtgatgaaggcgatccaggaggctcggaagatgagggagcagatccagagg
gagcagctgcaacatcaccagcagggcatagatgcgaagctgtctgccctcagctcagtg
ggcctcaaccactgtagggttgataaggagagggtgcatttcgacagcatcggacaccac
cttggcaaactgggagaggaagggaaaatcggccacagagtgatcgacctcaccaggcct
gaggatttagatgggtccaaggcagtcaatggctctgcagataaacccgaaccctattat
tgttggccaacaggaggtgctggatctaacgaggcgcgggtcttcagggagtcccgagga
cggaacaacaacgagccccacattaaaaggccgatgaatgcgttcatggtgtgggccaaa
gatgagcggcgcaagatcctccaggcgttcccggatatgcacaactccaacataagcaag
attttgggttctcggtggaaggctatgtctaaccaggacaagcagccgtactacgaagag
caagctcgcctgagtaagcttcacctagagaagtatccaaactacaagtacaagccacga
cctaagaggacctgtattatagacggcaaaaagcttcgtattggagagtacaagcagatg
atgcgctcacggcgacaagagatgagacagttcttcactgtgggccaaccacctcagatt
cccatcaccaccagcactagtatggtctacccaggaggcctcaccatggcaaacaccaca
ccctcacctcagatgacgtcagagtgctccagcgcctcagtcagccctgagccgtccatt
cccgtcattcagagtacttacaacatgaagctggagcccagtgccatggtgaacaacagc
gagccggtcaacggcgaggatgagatggacatgtacgaagacttcgaggacgagcccaaa
tcagactatagcagtgagaatgacacacaggagccggtcagcgccaactga
DBGET
integrated database retrieval system
