Poeciliopsis prolifica (blackstripe livebearer): 129365502
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Entry
129365502 CDS
T09758
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129365502 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprl03310
]
129365502 (roraa)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129365502 (roraa)
Nuclear receptors [BR:
pprl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129365502 (roraa)
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129365502
NCBI-ProteinID:
XP_054894710
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRKQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSAVKCHPPDRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLR
ALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcttcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaagcagacctgctcaagcaccaacagaggaatctcagtaacaaagaagacacac
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggtgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcgtactcctgcccccgtcagaaaaactgcttgatcgaccgcaccagccgcaaccgc
tgccagcactgcaggctgcagaagtgcctggcagtgggaatgtcacgagatgcggtgaag
tttggccgcatgtcaaagaagcagcgagacagcctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcagcgagaccaccaacagcagcccggagaggcagagccgctaacacct
agctacggcctctcagccaacggcctaacggagctacacgatgacctcagcggttacatg
gacggccacactcctgatggcagcaagcctgactcggcggtcagcagcttctacctggat
atccagccgtcccctgaccagtcgggcttagacatcaacggcatcaagccggagcccatc
tgcgactttgcccccggctctggcttttttccctactgctccttcaccaatggcgagacc
tcccccactgtttccatggctgaactagagcacctcgcccagaacatctcaaagtcacac
atggagacatgccagtacctgagagaggagctgcagcagatgacctggcaggctttcctt
caggaagaggtggagagctaccagagcaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctctggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctatttcgatggaaaa
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctct
gcttttgtgttgatgtctgctgtgaaatgtcatcctccagaccgatcctggcttcaggag
aaggtgaaagtggaaaaactccagcagaagatccaactggctcttcaacatgttctgcag
aagaaccacagagaggatggcattcttacaaagttgatatgcaaagtgtcgacactgcga
gcgctgtgcagtaggcatacagagaagctcacggctttcaaagcaatatacccagacatt
gtgcgtgcccacttcccccccttatataaggagctgttcggatcagactttgagcagtcc
atgcccgtcgatgggtaa
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