Poeciliopsis prolifica (blackstripe livebearer): 129366619
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Entry
129366619 CDS
T09758
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129366619
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129366619
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
C5HCH
zf-RING_10
Baculo_IE-1
zf-RING_11
Prok-RING_4
MutS_III
Motif
Other DBs
NCBI-GeneID:
129366619
NCBI-ProteinID:
XP_054896563
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQKGLQLDEDKYSCSICLDLLKDPVTIPCGHSYCMSCIRTHWDEEDHKKIYSCPQCREA
FKKKPVLKKSTILADLVEDLKRTGVRADPDDHCYAGPGDVACDVCTQRKLKAVRFCLTCP
ASYCEYHLQPHYDAPPLQKHKLVDPSKKLQENICPHHGDSDHPDQQDACFLCLTDENKDH
KKESGAAEMSRKQKKLLVRRQQIQKGIWDREKEMKLLWQEVEAINASADKAAEDSEKIFT
ELIRLTGKRSTDVQQQIRSQQESEVSRVRELQEKLEREITELKKKDAELEKLSNSDHNRF
LLNFSSLSIPSDATHSSSIKIRPLRYFEDVTTAVSELRDKLQNILRDTWSDISDAVAEVD
VLLSEPEPKTRAGFLKYSQEITLNPNTANSHLLLSDGNRKATVLKQKQLYSDHPDRFTSW
LQILSRESLTGRCYWEVEWKGRRVDIAASYKSISRAGNLDDCEFRSNYKSWSLYCDRNGY
TFWHNRIKTPVSGPVSSRVGVYLDHRAGTMSFYSVSGTMTLLHRVQATFTEPLLAGVGFY
KDGISAELLKLN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggacttcaactcgacgaggacaaatattcttgttccatctgtttggat
ctgctgaaggatccggtgaccataccctgcggacacagctactgtatgagctgcattaga
acccactgggatgaagaggatcacaagaaaatctacagctgcccccagtgcagggaggct
ttcaaaaagaagcctgttttgaagaaaagcacaatcttagccgatttagtggaggatctc
aagagaactggagtccgagctgatccggatgaccactgctatgccggaccaggagatgtg
gcttgtgatgtttgcactcaaaggaagttgaaggctgttaggttttgtttaacctgtcct
gcatcttactgcgagtatcacctccaacctcactatgacgctccacctttacagaagcat
aagttggtggacccttccaagaagctccaggagaacatctgtcctcatcatggtgactct
gatcaccctgatcagcaggatgcctgctttctctgtttgacagatgaaaataaagaccat
aaaaaagaatccggtgcagcagaaatgtctaggaagcagaagaagctcctggtgagacgg
cagcaaatccagaagggaatctgggatcgggagaaggaaatgaagctgctttggcaggag
gtggaggccatcaatgcttcagctgataaagcagcggaggacagtgagaagatcttcacc
gagctgatccgtctcaccgggaaaagaagcactgacgtgcaacagcaaatcagatcccaa
caggaaagcgaagtgagtcgagtcagagagcttcaggagaagctggagcgtgagatcact
gagctgaagaagaaagatgctgagctggagaagctctcaaactcagatcacaaccggttt
ttactcaacttttcctcactgtcaatacccagtgatgcgacacactcatccagcatcaaa
atacgtcctctgaggtactttgaggatgtgacaacagctgtgtcagagctcagagataaa
ctacagaacatcctgagagacacatggtcagacatctcagatgcagtcgctgaagtggat
gttttactgtcagaaccagaaccgaagacgagagctggattcttgaagtattcgcaagaa
atcactctgaatccaaatacagcaaatagccatttgttattatctgatgggaacagaaaa
gcaacagtactgaaacaaaagcagctttactctgatcatccagaccgattcaccagctgg
ctccagatcttgagcagagagagtttgacgggacgctgctactgggaggtggagtggaaa
gggaggcgagttgacattgcagcttcatacaagtcaatcagcagagcagggaacttagat
gattgtgagtttcgatctaactacaaatcttggtctttgtattgcgatagaaacggttac
acgttttggcacaacagaataaaaactccggtttcaggtcccgtttcctccagagtagga
gtgtacctggaccacagagcaggtactatgtcgttctacagcgtctctggaaccatgact
ctcctccacagagttcaggccacattcactgagccgctcctcgctggagttgggttttat
aaggacgggatttccgctgagttgctgaaactgaactag
DBGET
integrated database retrieval system