Poeciliopsis prolifica (blackstripe livebearer): 129370421
Help
Entry
129370421 CDS
T09758
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03250
Viral life cycle - HIV-1
pprl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129370421 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129370421 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129370421 (samhd1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129370421 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
HD
PDEase_I
Motif
Other DBs
NCBI-GeneID:
129370421
NCBI-ProteinID:
XP_054902374
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MESRKRPVCPAPSPDEEFQTPEKRVSVARDSPLDSGFMRWGVEETCQYLQREGLEEWKDK
FRAEKITGVGLRYLKDEDLEKIGIKCLGDRLQILHSLRKLWQIEAEPSKVFNDPIHGHVE
LHPLLIKIIDTPQFQRLRNIKQLGGTYYVFPGASHNRFEHSIGVGYLAGRLVQALNEKQP
ELLISRRDILCVQIAGLCHDLGHGPFSHMFDGMFIPKARPGINWKHEAASLKMFDYLVDD
NGLRPVMEEYGLVLPEDLDFIKEQIAGPTESSSGRGEKWPYKGRSKDKSFLYEIVANKMH
GIDVDKWDYFARDCHHLGIQNNFDYRRFLKFARVCEVDGQKHICTRDKEVGNLYDMFHTR
NCLHRRAYQHKVGNIIETMITEAFLKADPNIHIEGSQGKIFHLSTAIDDMVAYTKLTDNV
FEQILNSSSPELAEAKLILHKIICRQLYKCLGQTRPDKALTVTQENIHIWEADLAQSIPH
SGSRDVDLQPQDFVVSVITMDYGMKEKNPINNVRFYCKDDPTKAIKINKNQVSKLLPEHF
AEQLIRVYCKKTDERTLEAAKKHFVQWCMDRNFSKPQDGDVIAPELTPLKPSWCTNNEGE
DSDACSSKETNVHMNGLQKAKIQLNFQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcgaaagcgacccgtgtgtccggctcccagcccggacgaggagttccaaacc
ccggagaagagagtgtcggtggcccgagactcgcctctggactccggcttcatgcggtgg
ggagtggaggaaacctgtcaatacctgcaaagagaaggacttgaagagtggaaggataag
ttcagagctgagaagattacaggtgtgggactgaggtacctcaaggatgaagacctggag
aagattggcataaagtgtctcggtgaccgtctgcagattctgcacagcctcaggaaactg
tggcagattgaagctgagcccagcaaggtcttcaacgatcccatccatggccacgtggag
ctccatccgcttctgattaagatcatcgacacgcctcagtttcaaaggcttcgaaacatc
aagcagcttggagggacgtattacgtttttcctggggcctcccacaaccgctttgaacac
agcattggggtcgggtatttggctggacgacttgttcaagctctcaacgagaagcagcca
gagctcctcatctctcgcagggacattctttgcgtgcagatcgctggactctgccatgac
ctcggacatggacctttttcccatatgtttgatggcatgtttatacccaaagcacgtcca
ggaattaactggaagcacgaggccgcctctttaaaaatgtttgactaccttgtggatgac
aacggcctaagaccggtcatggaggagtacggtctggtgctgccagaggacctggacttt
atcaaggagcagatcgcaggaccgacagagagcagctcaggacgaggagagaagtggccg
tacaaaggccgttctaaagacaagtccttcctctatgagattgttgccaacaaaatgcac
ggtatcgatgtggataagtgggactattttgcaagggactgccatcatttgggcatccag
aacaactttgactatcggcgcttcctaaaatttgcaagggtctgtgaagtggatggacag
aagcacatctgcacaagagacaaggaagtgggcaatctgtacgacatgtttcacactagg
aactgtctccacagaagagcctaccagcacaaagtgggcaacatcatcgagacaatgatc
actgaagcatttttaaaagcagatccaaacatccacattgaaggctctcagggaaagatc
ttccatctgtccacagctattgatgacatggtggcctacacaaagctgacagataatgtg
tttgaacagatcctgaactcatcttctccagagcttgcagaagcaaagctgatactgcac
aaaatcatctgccggcaactctataagtgtctggggcaaacccgaccagacaaagccttg
actgtcactcaggaaaatattcacatttgggaggcagatttggctcagtccatcccccac
agtggctctcgtgatgttgatcttcagccacaggactttgttgtcagcgttatcacgatg
gactatgggatgaaggaaaagaatcccatcaataacgtgcgtttttactgcaaggatgac
ccaacaaaagccataaaaatcaataaaaaccaggtgtctaaacttctcccagagcacttt
gctgagcaactcatcagggtgtactgcaagaagacagatgagaggaccctggaggccgcc
aagaagcactttgttcagtggtgcatggacaggaacttctcaaagcctcaggatggagat
gtcatagcacctgagctgactcctctgaaacccagctggtgcaccaacaatgaaggcgaa
gacagtgatgcctgcagctccaaagaaacaaacgttcacatgaacggactccagaaagct
aagattcaacttaactttcagtga
DBGET
integrated database retrieval system
