Poeciliopsis prolifica (blackstripe livebearer): 129371913
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Entry
129371913 CDS
T09758
Symbol
skic3
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129371913 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129371913 (skic3)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129371913 (skic3)
BRITE hierarchy
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_17
TPR_11
TPR_12
TPR_9
ANAPC3
TPR_7
TPR_MalT
PknG_TPR
TPR_15
Motif
Other DBs
NCBI-GeneID:
129371913
NCBI-ProteinID:
XP_054904747
LinkDB
All DBs
Position
Unknown
AA seq
1569 aa
AA seq
DB search
MSNKEVKAALKSAREAINNKEFKEVLKHCKAVLKLEKNNYNAWVFIGKAASELEQPDQSQ
AAYRKAVELEPEQLLAWQGLANLYENTDQWDFKDELPSVYQKLVELYAKTDKTKSYDMIK
KLSDIYQSDREYLKLAKVWLQLVQLKEEEGVDKKELVQLLQKMTHLLSDCINDEEQDNET
QQHLITAFEKAMILTEPVPGEEHKKLSADYIKCLSKLPHEESKMKEACQSMLSVYPNQTY
PLEVLCSHYLKTNNMDEDAVSCFSRLLEMAPNSGLGHLGLGTKALLEGRYKEAVDDLEKG
IKKTSSATGWHSLAEAQFKIHRHSDSAASCSQGLNICTSEDKELRDKLLRLKLEALVRSE
GEQAASQALETFSQITEAEKDPVLLALKGRAYLNKGQIDQSLKLLSELEVSNPSLPQGLA
LRGLAYLAEGQHQLAEQSFLQATKQTPDSGEYFFFLGKLYWDMGSETRKDRSKTHTHLLK
AAKLDPHLGCAFRYLGHYYREVANDIARAQGCYRKAFQLNSGDAESGAALVDLSMGQGDM
DSALATLESVTEKATPGSAKWAWMRRGLYYLKVGEHQQAIADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVDEYLQITTQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQSIHNLFRAVQLRPDLSCLWKLLGDACT
AVRVVSPSRAQVVVPTLLSGFDSSTQDHMLTQAQTLKAGERCYAHALKLMPEVASLWYDL
GLNYYHQATNTSRPTDEHENSLNLEKAQQCLKKAIQMDSGNYSYWTALGVISMSRGLESY
ALAQHCFIKSIDVEPNNVVAWTNLGTLYLEKDNIELAHEAFKIAQSLEPLYVNCWIGQAL
IAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAIS
AAHVALCKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSLSSSEVLVFSL
GSCARALCNSGQWDKAVQVYKSTPLQDLSDLVGLALAYFRAGLYPESISVYERALAVTSN
EKEKAYILTALALLQHRQGNLDSAKTLLFKCSVLKEPISESLLCLCALGLVHSDTTLAAA
ALTELIKQGSASGDVVEQRCLLTCSLLALQGNYSAVQREASRAVHSNPGNPNLWALLSRV
IPQYYPRKAQGGAVAGHIACLFSMTQGKRALLFSGVNQVACGRHSGEDPHRNALKTMQKA
VLLCPDDPATWAGLMAACHTENTSCYLSGSAPRRHSLEHTLMSVVSEKVHSVEEMERPLV
QALEGWVLQQAVSGLMQQGQLEQAEALCTQVLNVSPEHPAVMLSLTQVQCQRLLMADSGA
VLTEQVLEQLNKVVMMNPTNLGAWHWLAAVYRSQGLLLQAVMAYRQSLQLALQLGAHSFQ
IASLLRLALLALEPCMAGVPGNEWKDLVMEATTEVLKLCSSPMALLFQALLQYVTKMTAR
ETRRLLERCIYVSSDDFPVTVVQVASWYLLRHLHAKNDQELLNVLLQHAKINGNKRLLDF
YTELTSSSS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagtgaaagccgctttgaaaagtgccagggaggccattaacaacaaa
gagttcaaagaagtcctgaagcactgcaaggctgttctgaaacttgaaaagaacaattac
aacgcctgggtgttcatcggcaaggcagccagtgaactggaacaacccgatcagtcacaa
gcagcctacaggaaggcggtggagctggagcccgagcagctgctggcctggcagggttta
gcaaatctttatgaaaatactgatcagtgggatttcaaagatgagctgccgagtgtctac
cagaagcttgtggagctttatgcaaagacggataaaactaaaagctacgacatgatcaaa
aagctgtcagatatttaccagtctgacagggaatatttgaagctggctaaggtttggctc
caactcgtccagctgaaggaggaagagggcgtggataagaaggagttagtgcagttattg
caaaagatgacccatctcctctctgactgcatcaatgacgaggagcaggacaacgagact
caacagcatttgataacggcatttgagaaggccatgattctcactgagcccgtgcctgga
gaggagcacaagaagctctcggctgattatattaaatgtctttcgaaactgccacacgaa
gaaagcaaaatgaaagaggcttgtcagtccatgttgtctgtgtacccaaaccaaacctat
cctctagaggtcctttgcagccactatctcaaaacaaataacatggatgaggatgcagtc
agctgtttttcccgactcctggaaatggcccccaacagtggattaggtcacttaggtctc
ggtaccaaggcacttctggaggggaggtataaagaagccgttgatgacctggaaaaagga
ataaagaaaacaagctcagcaacgggatggcacagcctggctgaggctcagtttaaaata
cacagacactcagacagcgctgcttcatgctcacaagggttaaacatttgtacttctgaa
gataaggagctgagagacaaactccttcgactgaagctggaggctttagtgagaagtgaa
ggagagcaggctgccagtcaggctctggagacattctcacagattactgaggctgaaaaa
gatccggttctgttagccctgaaaggacgtgcatacctcaacaaaggacagattgatcaa
tccctcaagcttttgtcagagctggaagtctccaacccaagtctgccccagggattggct
ctgagaggactggcatatttagctgaaggtcagcatcaactagcagagcagagcttcttg
caggctacaaagcagaccccagacagcggagagtacttcttcttccttggaaaactttat
tgggatatgggctcagagacccgtaaagaccggagtaaaactcacacacacttgctaaag
gcagcaaagttggatccgcatcttggctgcgcatttcgctaccttggccattattaccgg
gaggtggcaaatgacattgctcgtgcacaggggtgctataggaaggctttccagttaaac
agtggcgatgccgaatctggagctgctttggtggatctcagcatgggacagggagatatg
gacagtgcattggccaccctggagtcagtgacagagaaagccacaccgggctcagctaaa
tgggcctggatgagacgaggcctgtactacctgaaggttggagaacaccaacaagccata
gcagacttgcaggctgctttgagggcagatcctgaggactgggtttgttgggaatgttta
ggcgaggcctatctgaaccgaaggagcttcacagcagctctgaaggccttcggcaaagca
catcagctccagcccagctccatctacagtgtctaccaggctgctgccataaaacagact
ctgggaaagttcaaggaggccgtggatgagtatttgcaaatcacaacacagcaggactat
gttcctgctctgaaaggccttggggagtgtcagttgtctttggcaaagagtttaatggag
gactgcagagatggaggcgccattgacctcattcaacaatccatacacaacctctttaga
gctgtgcagctgcgaccagacctgtcttgtttgtggaagctgctgggagatgcgtgcacc
gctgtcagagttgtttcaccgagcagggctcaggttgtggtaccaaccttgctgtctgga
ttcgactccagcacacaggatcacatgttgacccaagctcagacactcaaagctggcgag
aggtgttatgcccatgctttgaagctgatgcctgaggttgccagcctttggtatgacttg
gggctaaattattaccaccaggccacaaacacatcccgccctacagatgaacacgaaaac
tctttgaacctggagaaggcacaacagtgcttgaaaaaagctatccagatggacagtggg
aactacagctactggactgctttgggggtgatttccatgtccagaggtctggagagctat
gctttggctcagcattgcttcatcaagtccatagacgttgagccaaacaatgttgtcgca
tggacaaaccttggtacgctgtatttagaaaaggacaacattgagcttgcacacgaagcc
ttcaaaattgcccagtctttggagccactgtatgtcaactgctggattggacaggcgctg
atcgcagaacgagtgggaagctacgacactatggatcttttcaggcacaccactgaactc
agcacacatatggaaggagtcaaaggttacgcctactgggtttgttccacgcttctggat
aagagcaacagggacagtgaactgtaccgctacaacattgtgcaaatgaatgccatctca
gctgctcatgtagcactctgcaagtacacagaacgaattcagtctgacccagacgccttt
attatgctgggttaccttaacgaacatctgcagctgaagaggcaggccttacaagcctac
caaagagctgttgaacttcttcagtccttgtcctcttcagaagtgttggtcttctcactt
ggcagctgtgctcgtgctttgtgcaactcgggccagtgggacaaagcagtccaggtttat
aagtccactccacttcaggacctcagtgacctggtagggctggctttggcctacttcaga
gcaggactctacccagaaagcattagtgtgtatgagcgagccttggctgtgacctccaat
gagaaggagaaggcttacatactgactgctctggctctgctgcagcatcgacagggcaac
ctagactcagccaagacgctgcttttcaaatgctcagtgttaaaggagcccatctcagag
tctctgctttgcttgtgtgcgctgggattggtgcacagcgacaccacactggctgcagcc
gccctgactgagctgataaagcaagggtccgcctcaggggatgttgtagagcagcgatgt
ctactcacctgctccttgctggcccttcagggcaactacagtgctgtgcaaagagaggcc
tccagagctgtgcacagtaatcctggaaatcccaacctttgggctcttctgtccagagtg
atccctcagtactaccccagaaaggctcaggggggcgcagtagctggccacatcgcctgt
ctctttagcatgactcaagggaagagggcgctgttgtttagtggtgtgaaccaagtggct
tgtgggagacactctggagaggatcctcacaggaatgcactgaagaccatgcagaaagct
gtcctcctctgccctgatgatccagcaacatgggctggattaatggcagcctgtcacact
gaaaacacctcctgttatctttctggctctgctcctcgccgacactcattggaacacact
ctgatgtctgtggtttctgagaaagtgcatagcgtggaagagatggagcgccctctagtc
caggctctggaaggctgggtgttacagcaggctgtgtctggtctcatgcaacaaggacag
ctggagcaagcagaggctctctgcacacaggttctcaatgtgtcccctgagcacccagca
gtgatgctgtcactgacgcaggttcagtgccagcgcctcctcatggctgacagtggtgct
gtccttacagagcaggtcctggagcagctaaacaaagtcgtaatgatgaaccccaccaac
cttggagcatggcattggctggctgcagtgtatcgtagccagggcctcctgctccaggct
gtgatggcttacagacagagcctacagcttgccctgcagcttggcgcacacagcttccag
attgccagcctcctccgactggctctgctggctcttgaaccctgcatggctggagttcct
ggaaatgaatggaaggatcttgttatggaagccactacggaggtcttgaagctgtgctct
tctcccatggccctcctcttccaggccttgctccaatatgtgaccaagatgactgcaagg
gaaacgaggcgtttgctggagaggtgcatttatgtttcatctgatgatttcccagtaacg
gtggtgcaggtggcgagttggtacctcctcagacacttgcatgccaaaaatgatcaagaa
ctccttaacgttcttctgcaacatgccaaaatcaatggaaataaaaggttgctggatttt
tacacagaactaacatcttcctcatcatga
DBGET
integrated database retrieval system
