Pimephales promelas (fathead minnow): 120460340
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Entry
120460340 CDS
T08155
Name
(RefSeq) syntaxin-7-like isoform X1
KO
K08488
syntaxin 7
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04130
SNARE interactions in vesicular transport
pprm04140
Autophagy - animal
pprm04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120460340
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120460340
04140 Autophagy - animal
120460340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120460340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120460340
Membrane trafficking [BR:
pprm04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
120460340
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120460340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Syntaxin
TAP42
ANIS5_cation-bd
Prominin
DUF3939
DUF3452
E1-E2_ATPase
Cep57_CLD_2
Glycophorin_A
ALIX_LYPXL_bnd
Enkurin
Sec10_N
MCPsignal
DUF6548
Motif
Other DBs
NCBI-GeneID:
120460340
NCBI-ProteinID:
XP_039504009
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MSGSSGVDANLLAHNISSNIQRITLLTNEIQQMMRHFGTAQDTTILRQTLQEKQQNVNHL
AKVTDKYMKDFSALPVTPEQRQRKIQRERLITEFSNALGVLQKVQREVAKKEKEFVERVR
ASSRVSAGDPNDGFGGIASPFKSFEIQAQTQSYEENFTEEDLQLIQERESAIRQLESDIT
NINDIFRDLGMMVHEQGDMIDSIEANVSTAEVHVQSATQNLNRAASYQTSFRKKIFIFIA
ILVVVAVIIGLIVWASQKQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtcaagtggagttgatgcaaatttgcttgcacacaatataagttcaaatatc
cagagaataacactgctgactaatgaaatccagcagatgatgagacattttggaacagca
caagacacgactatcctgcgacaaacattacaggagaaacagcagaatgtcaatcatctt
gctaaagtgaccgataaatacatgaaagatttcagcgctttacctgtgaccccagaacag
cggcaaagaaaaatccagcgagagcgtctcatcactgaattctccaacgcactgggtgtt
ttacagaaagttcagcgtgaggttgcaaagaaagagaaggagtttgtggaacgtgtccgt
gcgagctcaagagtttcagctggtgatccaaatgatggcttcggaggaattgcgtcaccc
tttaaaagttttgagattcaggctcaaactcagagctatgaggagaacttcacagaagaa
gatctgcagctcattcaggagagagaatcagcgatcagacagctggagtcggacattaca
aatattaatgacatcttcagagatctggggatgatggtgcatgaacagggagacatgatt
gacagtatagaggccaatgtatcaacagcagaggtccatgtgcagtcagcaacacaaaat
ctgaatagagcagcaagttaccagacgtcattccgcaagaagatcttcatcttcatcgct
attctggttgtggtggctgtcattattggtttgattgtctgggcgtctcagaaacaatga
DBGET
integrated database retrieval system