Pimephales promelas (fathead minnow): 120462785
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Entry
120462785 CDS
T08155
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120462785 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120462785 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120462785 (thrb)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120462785 (thrb)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
120462785 (thrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
120462785
NCBI-ProteinID:
XP_039507391
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MNYCMSDMYDIGHGVNGGYAVPPGGEYCMYGGEGPGFTHCEPQPLHHHPPSMEQAWPPSQ
PYGCPFNGANPVFKSELCSMEVPLSHYHQPDYYSDGRPDLSQMQWMQGPHRKGYIPSYLD
KDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQ
ECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRREEMQKTVWDRPEPTQEEWELI
RVVTEAHMATNAQGNHWKQKRKFLVEEAMLLNEITCNLFCTSDQSAVGVKEAKPEDIGSA
PIVNAPEGSKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIM
SLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALL
QAVILLSSDRPGLTSVERIERCQEEFLLAFEHYINYRKHKVAHFWPKLLMKVTDLRMIGA
CHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaattactgcatgtcagacatgtatgacataggccacggtgtgaatgggggatatgca
gtgccgcccggaggtgagtactgcatgtatggtggagaagggcctggtttcactcactgt
gagccacagccgttacaccaccatcctcccagcatggagcaggcctggccgcccagccaa
ccctacgggtgccctttcaatggggccaaccctgtgttcaagagtgagttgtgctccatg
gaggtgcctctcagtcactaccaccagccagactactactctgatggcaggccagacttg
tctcagatgcagtggatgcaggggcctcacaggaaagggtacataccaagttacctggac
aaggatgagctgtgtgttgtgtgtggggacaaagcaactggctaccattaccgatgcatc
acctgtgagggctgcaaagggttttttcgacgcacaattcagaagaacttaaacccaaca
tatgcttgcaagtacgagggaaagtgcgtcattgacaaagtcacccgcaaccagtgccaa
gaatgtcgcttcaagaaatgcattgctgtcggcatggcaacagacttggtgttggatgac
agtaagcgtctagccaagcggaagctgatcgaggagaaccgagaacggcggcggcgcgag
gagatgcagaagacggtgtgggaccggccggagcccacgcaggaggagtgggagctgatc
cgggttgtcacagaggcgcatatggccacaaacgctcaaggcaatcactggaaacagaag
cgtaaattcctggtcgaggaagcaatgctacttaatgaaataacatgtaatttattctgt
acttctgaccagagtgcagtgggggtgaaggaagcaaagccggaggacatcggttcggca
cccatcgtcaacgcaccagaagggagcaaagtggacatagaagccttcagtcaatttaca
aaaattatcacccccgcaattactcgtgtcgtagattttgccaaaaagctgcccatgttc
tgcgagctgccttgtgaggaccagatcattttgctgaagggttgctgtatggagatcatg
tctctgcgagcggcggtgcgctatgatccagagagtgagaccctaacgctgaatggggag
atggccgtcacacgaggccagctcaagaacgggggtctgggtgtggtctcggatgccatt
tttgatctgggtgtgtcgctgtcctccttcaacctcgacgattcggaggtggcattgctc
caagccgtgattctgctttcctctgatcgtccaggtttaacgagcgtagagcggatagag
cgttgtcaggaggagttcctcttggcctttgaacattacattaactaccgtaagcacaag
gtggctcacttctggcccaagctgctgatgaaggtgacggacctgcgcatgatcggtgcc
tgccatgccagccgtttcctgcacatgaaggtggagtgtcccacggagctcttcccaccg
ctcttcctggaagtgttcgaggactga
DBGET
integrated database retrieval system
