Pimephales promelas (fathead minnow): 120463197
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Entry
120463197 CDS
T08155
Symbol
u2af2b
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2b isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120463197 (u2af2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120463197 (u2af2b)
Spliceosome [BR:
pprm03041
]
Complex A
U2 snRNP components
U2 related factors
120463197 (u2af2b)
Complex B
120463197 (u2af2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Transformer
Motif
Other DBs
NCBI-GeneID:
120463197
NCBI-ProteinID:
XP_039508047
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSDFDEFERQLSENKQGDSLNGHERDKENRHRRRSPSRSRSRERKRRSRERRSRERRSDS
KDRRHRRSDQIQNHPQENVSRSPQREKKKKIKKYWDVPPPGFEHITPMQYKAMQAAGQIP
ATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGG
LTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPG
MSENPSVYVPGVVSTVVPDSIHKLFIGGLPNYLNDDQDRLFEHQVKELLTSFGPLKAFNL
VKDSATGLSKGYAFCEYVDVNINDQAIAGLNGMQLADKKLLVQRASVGAKNATMTSINET
PVTLQVPGMMANSMMQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVKEECSKYGQVK
SIEIPRPVDGLDIPGTGKIFVEFTSVYDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRD
FW
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgatgaattcgagagacagctatctgaaaacaaacaaggtgacagtcta
aacggtcatgagcgggacaaagagaaccggcaccggcgccgcagcccttcacgcagccgc
agtcgagagaggaagaggaggagcagagagagaagaagcagggaacgccgcagcgacagc
aaggaccgccgccatagacgcagtgatcaaattcagaaccatccccaagaaaacgtcagc
cgttcacctcaacgggagaaaaagaagaaaattaagaagtactgggatgtaccgcctcct
ggctttgagcatattacacctatgcagtacaaggcaatgcaagctgctggtcagatccct
gccaccgctttgctgcccaccatgacgccagacggcctggcagtaacgccgaccccggtg
cccgtagtgggcagtcagatgactcgccaggcccgcagactttacgttggcaatatccca
tttggcatcacagaggaatccatgatggacttcttcaatgcccagatgagacttggtggt
ctgactcaggccccaggaaaccctgttcttgccgtccagattaaccaggacaagaacttt
gctttccttgagttccgatcagtggatgagaccacacaggccatggcgtttgatggcatc
atcttccaggggcagagtttaaagattcgccggccacatgattatcagccattacctggc
atgagcgagaaccccagcgtatatgtgccgggtgtggtgtccactgttgtaccagactct
attcacaagcttttcattggaggtttgcccaactatctcaacgacgaccaggacagattg
tttgaacaccaggttaaagagttgttaacctcttttggacctctcaaagccttcaatttg
gttaaggacagcgctaccggcctctcaaagggctatgctttctgtgaatatgtggatgtt
aacatcaatgatcaggctattgcgggattgaatggtatgcagttagcggataagaagctg
ctggttcagagggcaagtgttggggccaagaatgccacaatgacgagtataaatgagact
ccggtgacgttgcaagtaccggggatgatggcaaactccatgatgcagatgggcggcatc
cctaccgaagtcctgtgcctgatgaacatggtggctccagaggagctcctggacgacgag
gagtacgaggaaatagtggaggacgtcaaggaggagtgctccaaatatggccaggtcaag
agcatagagattcctcggcctgttgatggccttgatatccctggaaccggcaagatcttt
gtggagttcacatccgtctacgactcccagaaagccatgcagggcttaacggggagaaag
ttcgccaacagagtggtggtgaccaagtactgcgatccagatgcctaccaccgccgagac
ttctggtag
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integrated database retrieval system
