Pimephales promelas (fathead minnow): 120463666
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Entry
120463666 CDS
T08155
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120463666
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120463666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
DUF5446
DUF3829
Motif
Other DBs
NCBI-GeneID:
120463666
NCBI-ProteinID:
XP_039508869
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAEAKFSRDEFLCSVCLDLLKDPVAIPCGHSYCKICITDCWDQEDEKRVYSCPQCRQTFS
SRPALAKNTMLAEVVEKLKKTTLPAECYAGAGDVQCDVCTGRKHKAVKSCLVCLNSYCQS
HLEQHESFFKGKRHNLTEATGRLQEMICQTHDKLLEVFCRTDQKCICVLCVMDEHKNHDT
VSAAAQRTEKQLQLKETQRSIQQRIQQREKDLQQLREAVASHKRSAQTAVQDSERIFTEI
IRSIERSRSEVTKLIRDEEKTAVSRAEGRLKRLEQEINDLRRRHAELEQLSHTQDHIQFL
QSFQSLSAPSESTDVNDNPCSPLSSFDSVRESVRQLRDKLEDFCKEELKKISDRVTFTNI
VPRTRNDFLQYLLPLTPDLNTVNKRLCLTENNRVITRTDTEQPYPDHPDRFDDVRQVLCR
ESVCGRCYWEIEWSGRDVCMSVSYKSISRKGLGNECVFGNNDQSWSLECTPSRYSFRHNN
IQTDLPVKPISSSIGECVCDRRIGVYVDPSAGTLSFYSVSDTMSLIHTVQTTFTHTLYPG
FVVYIGSSVKLC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccaagttttctcgggatgaattcctgtgttcagtgtgtctggatctcctg
aaggatccagtggccattccctgtggacacagttactgtaagatctgtattacagactgc
tgggatcaggaggatgagaagagagtctacagctgccctcagtgcagacagaccttcagt
tcaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactaaagaag
actacacttcctgctgagtgttacgctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaacacaaagccgtcaagtcctgtctggtgtgtctgaactcttactgtcagagt
caccttgaacaacatgagagtttctttaaaggaaagagacacaatctgactgaagccact
ggacgactgcaggagatgatctgccaaacacatgataaactcctggaggttttctgccgc
actgatcagaagtgtatatgtgtgctgtgtgtgatggatgaacataaaaaccacgacact
gtatcagctgcagcgcagaggacagagaaacagctacagctgaaggagacgcagaggtcg
atccagcagaggatccagcagagagagaaagatcttcagcagctgagagaggctgtggcg
tctcataagcgctctgcacagacagcagtgcaggacagtgagaggatcttcactgagatc
atccgctccattgagagaagccgctctgaggtgactaagctgatcagagatgaggaaaag
actgcagtgagtcgagctgaaggacgactgaagcgactggagcaggagatcaatgatctg
aggaggagacacgctgagctggagcagctttcacacacacaggatcacatccagttcctg
cagagtttccagtctctctcggctccttctgaatcaacagacgtgaatgacaatccctgc
agtcctctctcctcttttgatagtgtgagagaatctgtccgtcagctgagagacaaactg
gaggatttctgcaaagaggagctgaagaagatctctgacagagtcactttcaccaacatt
gttcccagaaccaggaacgacttcctacagtatcttcttccgctcactccggatctgaac
actgtgaataaacgcctctgtctgacagagaacaacagagtgattactcgcactgacaca
gaacagccgtatcccgatcatccagacagatttgatgatgtgcgtcaggtgttgtgtaga
gagagtgtgtgtggacgctgttactgggagattgagtggagtgggagagatgtgtgtatg
tcagtgtcatataagagcatcagcaggaagggattgggtaatgagtgtgtgtttggaaat
aatgatcagtcctggagtttggagtgcactccctccagatactcattcagacacaataac
atacagactgatctccctgtaaagcccatcagcagcagtataggagagtgtgtgtgtgac
aggagaataggagtgtatgtggatcccagtgcaggaactctgtccttctacagcgtctct
gacacaatgagcctcatacacacagtccagaccacattcacacacacactctatcctggg
tttgtggtttatataggatcatcagtgaaactgtgttga
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