Pimephales promelas (fathead minnow): 120468205
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Entry
120468205 CDS
T08155
Symbol
tcf20
Name
(RefSeq) transcription factor 20
KO
K24769
transcription factor 20
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120468205 (tcf20)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120468205 (tcf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
120468205
NCBI-ProteinID:
XP_039512811
LinkDB
All DBs
Position
Unknown
AA seq
2375 aa
AA seq
DB search
MQNFPNSPVPVHPGFSRGGSVVSSPYPAHSSDLQVSPRTSEDYAMQQAQPNLQSHGQLLH
LRSQQHLLHAPAVHGYGARRAAGEMAQGNTHSGGGGGNSYRKDSVDYYFSVSGRERSRRG
GAAYGAGFRYTNLDGHVPHQYPHLSGSGSSSGMISPYSMEYGSSSGSAVGSSNSGSAGSF
SPSQQYSMAHSTSVQSGAQMHQRQHGPKYPSHQGLHQGQHHRTYPLSGNRMPPQFGHYAP
INATSDSTGMYNSPPLRYDVISNSSTDAKMNNSPSQSNPNTHTSSSASNSCENMGQSYSS
SAHPPYSPQSQSLHKHAPSSQRSSQHSTGAGYEASLKMQHQGNLQSKLPHSSVSSSPALP
SQPPQDLTKSPMHSQSQQAHIHQNFSPISNPSPAPSAVQSPSCSSSSSPLMGSSEANSAA
THMQTPSHPSVSNTRISQSHGRLLQAVPQLSPTPNSNSSISSCGSGVGTKVAGLNHSAGI
GHASMSQNRLGLGHRGGPGEDGALYPHEKLLQDPGLNSLNALTSQVENLPNTVQHMLLTD
TVLPQRKSRDNAHHLQMQQGSQSLPGNQNKPGTASASGQTSANEESSEMLETKGHQQLEY
KRIRQASGTSNESEPQSYPSSQSQMSSEQALDLQVNPRGISTASKQLSTRESQTKTPETL
TPSSSSPPSVHPPAEHSPKQQLHPPAPASPVPSAHPNCAEKRDPGINDKGRMIKMIKDEE
SEAESADPPCDRENSENRLSVSTTQDEAETDAQHFENPSKTVNVSEQHNVGGVGVIVSAR
SEPNNESSKHTGAKSPRYVVSHYPNKHSNPEERHDVNVLRETRNHNGEGEVCMDTYVSQY
DISPKQEFGQNIPSIQSHPVSFKYSNPEVHFNSTKSKGKLGLGSAMGANRSQNYHQLQAS
YGSIARKEIGVFALEGGRGIVSRSQDSSSQFQQSFPSLLQEVLQGHHLDRRYGRPDQTAS
VHQQPQDPSQHRYQTRLPCGMVENLSSPAMSSQTIMGGLNVQFSQMASGKQPNTSQNQGS
DNEIVLGPPHPSWDSEAHKPNVTHGISLEKGKTNLSPSQSTHMQQSLDLTTGAPPKHINL
ADYSLQHRKPSRYGPSPSAVEQLLLQEAEPLACGPISHTQSQTSTSSGRRSVICDVSPSR
RTTPERERGHSGATGPSVIQQPFSSSGSNGQECCKEEIKAKKAQNKEDSSKIEAAGQNTD
GYCSTPHSKECNKPLHSPVDVISDLEKPSSAKGNNEATSNVPYISQMSSNPLSSPPRHQS
FSQVVDRFRAYGFSDTIDGQKMVSHPITHQPFHTISAYSKTTPSTSKLQAFPQSLPPQDR
PDWTPDRQRLRGMDKHVPQRLPEQKCKSQSSSAILPSQHHISRQHSYLRSHFDMKIWDAY
SERDGPGQPPTAMPREHAISQKVTNAGPKLKEEDISDKSAEDTAKSFHSVASAGAISPAG
HTAKAIQGIQQGQRLTKTGASAETNPLIMRRRVRSFISPIPAKRQHQDVPGQRPGSAYHS
PLSQSHSDSRHAINNCSSSTDTQPKLHSPKTPHSISSANSPPQSKAKFLPPRKGRGLKLE
AIVQKITPSVKKNDFNNSHVESDFLEVSHYTSDMPDPEGGTLFAGAPQGEEACLSYLDDS
HTLEDLMPYRAVEDAFSCDPQSLKPGSTASRSCALRRLPKDFDFGLGAAGSSGSLVGENK
DDFTLLGPLPPAPPLPCPVQGSPPPSSSALSDIQQFTNTYQQLETRRSEQSAANLLRQKL
QETGMGFDDYPGGDYYGATTGQSPGHHLLSRASQHQMNSLGLTCSESKLSDNMVPKGYFP
SGKKKGRPVGSVNKQKRAQAQIQNAATSIPSSPLPSPTAVPQPVPVPNTPDEVSQEPTPP
DQIPCPPLVPPAETQVVKEDVECEETQPELDLKPAKHKQRKGKEGNETAGTSGNQRRRRG
MAPKEEVDLQTSGRGSMTLCGIFPDTRNNVFAPYVHVEKKVEEIGAVCTIINAEDEKSKG
GGKAGHLGADVLLNTPLSSQLVRKEKENERTKENWVSEQVDSALQSGKILPTSGYVLSGP
VISETGHTGRLLCCLCQKWANYKHLGDLYGPFYPAEYAAKLPKNPPQVRQTLSYHGAATT
VSSMTSIPTDSTPQDTSLQDSQNVKSYVGSDCTVSQATNLTSPATPIGTVFPSMGEEMAF
HTAITSSSTVMVTAHTWNPAAELSGLGTSNVQDLNSELLLKQLHVENSQQRPQHRKLTSH
PRFKRRHKSSEDLPRTVPINSKASLPFQPPPPSLDSLGPMAQLTQLPLVPLDPEELWVHE
GCIVWTSGVYLVNGRLYGLQEALDGARDTSCSHCEMVGSTLGCYSKGCTLRYHYLCAIEA
DCSLNEDNFSLRCPKHKSNRIAKPGAVYLEQSERG
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattttcccaatagtccagtccctgttcatccagggtttagccggggaggaagt
gttgtcagttccccatatccggcccactcttcagaccttcaggtgtcccccagaacctcc
gaagactacgccatgcagcaagctcaacctaacctgcagagtcacgggcagctcctgcac
ctgcggagccaacagcatctgctacacgctcctgctgtgcacggctatggggccaggaga
gcagctggagagatggcgcagggaaacactcacagtggaggaggtggagggaactcttac
cgtaaagacagtgtggattattacttctcagtgagtgggcgagaaagaagcaggagaggc
ggcgcggcgtatggtgcgggatttaggtacacgaacctagatggacatgtacctcatcag
tacccgcacttgtctggttcagggtcgtcctctggaatgatttctccctactctatggag
tatggctccagcagtggctctgcagttgggagtagtaatagtggcagcgctggttcgttt
tctccttcccagcaatacagtatggctcattctacttcagtacaatcaggtgctcaaatg
catcaacgccagcatggcccgaaatacccctcacatcaaggattacaccaaggtcagcat
caccggacgtacccgctttctggaaacagaatgccccctcagttcggacactacgcccca
attaatgcaacctcagactctactggaatgtacaactctccaccgctaagatacgacgtg
atcagcaacagcagtacggatgccaaaatgaacaactcgcccagtcagtctaatccaaac
actcacacaagttcatctgcttcaaacagctgtgagaatatgggacaaagctactcgtcg
tctgctcatcctccatattcgccccaatctcagtcccttcacaagcacgctcccagttcc
cagcgtagctctcagcacagcactggagcaggttatgaagcttccctcaaaatgcagcac
cagggaaacctgcagtccaaactgccccattcatcggtctcctctagccctgctctgcct
tcacaaccccctcaagacctcaccaaatctcctatgcattcccaaagtcaacaggctcac
attcatcagaatttcagtcccatatctaatccctcccctgctccatctgctgtacagtct
ccaagctgcagctcctcttcgtctccactaatggggagttcagaggctaatagtgcagct
acgcatatgcagactccatcacacccctctgtttcaaacactcgcatcagtcaaagccat
ggacgccttctgcaggccgtacctcagctgagccccactcccaattcaaatagcagtatt
agtagttgtggcagcggtgtaggaactaaagtggctggtttgaaccacagcgcagggatc
ggtcacgcttccatgagtcagaaccgactaggactaggtcatcgaggcggtccaggggaa
gatggcgccctgtatcctcatgaaaaactcttgcaggaccctggtctaaatagtctaaat
gctctgacctctcaagtggaaaatctacctaatacagtgcagcacatgctgctaacagac
actgtgctgcctcagaggaagagcagagacaatgcacatcaccttcagatgcagcaggga
tctcagtctttaccgggcaaccaaaacaaacctgggactgccagtgccagtggtcagacc
tcagcgaatgaagagagttctgagatgctggaaacaaaagggcatcagcaattggaatac
aagagaattaggcaagcaagcggaacaagcaatgaatctgagccacagagctacccatca
tcacagagtcagatgtcatcagaacaggcattggatctccaggtcaaccctagaggcatt
tcaacagcttcaaaacagttatctactagagagtctcaaacaaagacaccagaaaccctg
acgccctcctcctcttcaccaccatcagttcatcctcctgcagaacacagcccaaaacaa
cagttacatccccctgctccagcatctcccgtgccctcagcacatccgaactgtgcagaa
aaacgagaccctggaattaatgataagggaagaatgatcaaaatgataaaagatgaagaa
agcgaagctgaaagtgcagatcctccctgtgatagagaaaattcagagaatagactgtcg
gtctctaccacacaggatgaagcggagacagatgcacaacattttgaaaatccaagtaaa
actgtgaatgtttcagagcaacataatgttggaggtgttggggttattgtctctgctcgt
tctgaaccgaacaatgaatcaagcaagcacacgggagccaaatctccacgttatgttgtt
tctcattacccaaacaaacacagcaatcctgaggagcgacatgatgtcaatgtcttaaga
gagacaagaaatcacaatggagaaggggaagtgtgcatggacacatatgtctcacaatat
gatatttcccctaaacaagaatttggccaaaacatcccctctattcaatctcacccagtc
tcatttaaatacagtaatcctgaagtacatttcaattctacaaagagcaagggaaagttg
ggactaggcagtgctatgggtgcaaatagaagccagaattatcatcagctgcaggccagc
tatgggtctattgctagaaaggagattggtgtttttgctttggagggggggagagggatc
gtctcaagaagtcaggatagcagttcccagtttcagcaatcgtttccaagtcttttgcaa
gaagtcctccaaggtcatcacttagatcgacgctatggacgtcctgaccagacagcaagt
gttcatcaacaacctcaagatccatcccagcaccgttatcaaactagactaccttgcggt
atggttgaaaatttgagttcacctgcaatgagctctcagacaattatgggtggacttaat
gtccagttcagtcaaatggcctctggaaaacaaccgaatacaagccaaaatcagggatca
gataatgagatagttttaggtcctcctcatccctcttgggattctgaagcacataagccc
aacgtgactcatgggatctccttagaaaaaggcaaaaccaatctgtctccaagccagtcc
acccacatgcagcagtctttagatctcacaacaggagcccctccaaagcacattaatttg
gctgactattctttgcagcacagaaaaccctccaggtatggtccctctccttctgctgtg
gaacaactgcttttacaggaagctgagccactggcatgtggtcctatcagtcacactcaa
tctcagacatccacgtcctcaggaaggcgctcggtaatctgcgatgtgtctccttctcga
cgaacaacaccagaaagagagaggggacactctggggccactggaccctcagtcattcag
cagccattttcctcttctggatcaaacggtcaagaatgttgcaaggaagaaataaaagca
aagaaagcacaaaacaaggaggactcgtcaaagattgaagctgcaggccagaacacagat
ggttactgcagcacgccacacagtaaggagtgtaacaagccccttcattcccctgtagat
gttatttctgatttagaaaaacccagcagtgccaaaggcaacaatgaagccaccagcaac
gtgccatatatttcgcaaatgtcctcgaatcctttgtcctcaccaccaagacaccagtca
ttttcacaggtagttgatcgtttccgagcatatggcttcagtgacaccatagatggacaa
aaaatggtctcccatcctataactcatcaaccattccacaccatatcagcatattctaaa
accacaccctctactagcaagttacaagcgtttccacagagcttaccccctcaagacaga
cccgactggactcctgacaggcaaaggctaagaggtatggacaagcacgttcctcagaga
ctccctgaacagaagtgtaaatcccaatcctcaagtgctattctgcctagtcagcatcac
atatctcggcagcactcttatctccgttcacactttgacatgaaaatatgggatgcttat
tctgaaagagatggtcctggacaaccaccgactgcaatgcctcgtgagcatgctatttct
caaaaagttacaaatgctggccctaaacttaaagaagaggacatctcagataagagcgca
gaagacactgccaaatctttccactcagtggcttcagctggtgctattagcccggctggg
cacactgctaaggctatccaagggattcagcaggggcagagactaaccaaaactggagca
tcggctgaaaccaaccctttaatcatgagaaggagagttcgatcttttatttctcctatt
ccagctaagaggcagcatcaggatgttccaggtcagcggccaggatcagcttatcactcc
ccattatctcagtcccactctgattctagacatgcaatcaacaattgttctagcagtact
gatactcagccaaaattgcattctcccaagactccgcattctatatccagtgcaaactca
cctcctcagtccaaagcaaagtttcttcccccaagaaagggtcggggtctgaaacttgag
gcaatcgtgcagaaaattactccaagtgtgaaaaaaaatgacttcaacaacagtcatgtg
gaatctgacttcttggaagtatctcattacacctcggacatgcctgaccctgagggtggc
acgttgttcgctggtgctccacaaggagaagaggcctgtttatcttacctagatgattct
catactttagaggatctcatgccatacagagcagttgaagatgccttctcttgtgatccc
cagtctctcaaaccaggttcaacagcttctcgcagttgtgccctcagaaggttgcctaaa
gattttgactttggattaggtgctgctggttcttcagggtctttggtgggtgaaaataag
gatgattttactttgttaggaccccttccaccagctcctccactaccttgtcctgtacag
ggatcccctcctccatcttcatctgcattgtctgacatacagcagttcacaaacacttat
caacagctggaaacccggcgaagcgagcagtcagctgctaacctgcttaggcagaaactg
caagagactggcatgggctttgatgattacccaggtggggattactatggggccaccact
ggccagagccctgggcaccaccttctgtccagagcttctcagcaccagatgaattctctc
gggttgacatgttctgagtctaaactgtcagataacatggtgcccaaagggtatttccca
tcagggaagaaaaagggtcgcccagtaggcagtgtgaataagcagaaacgtgcccaagca
caaattcagaatgcagcaacaagcataccctcctctcctcttccctcacctacagctgta
cctcagcctgtcccagtcccaaacacaccagatgaagtgtcccaagaaccaacaccacct
gaccagataccctgtccacctttagtccctcctgctgaaacccaggtggtgaaggaggat
gtagagtgtgaagagacccagccagagttagatttgaagcctgctaaacataaacagaga
aaggggaaagagggcaacgagactgctggtacaagtggcaatcagagaaggaggagagga
atggctcccaaagaggaggttgaccttcaaacgagcggtaggggaagcatgaccctttgt
ggaatattcccagataccagaaataatgttttcgctccttacgtacatgtggagaaaaag
gttgaagagattggggcagtctgtacaattattaatgccgaggatgaaaaatcaaaaggt
ggaggcaaagctggccacttaggggctgatgtcctgttaaataccccgctgtcatctcag
cttgtgagaaaagaaaaggaaaatgaaagaacaaaagaaaattgggtttcagagcaagtt
gattctgccttgcaatccgggaagatacttcctacatctggatatgttctgtcagggcct
gtgatatcagagactggacacactggtcgcctcctatgctgtctttgccagaaatgggcc
aactacaagcatctcggggatctctatggtcctttttacccagccgaatatgcagccaag
ctcccgaagaatccacctcaagtccgacaaaccttgtcctaccatggggctgccaccaca
gtttccagtatgacatccattccgacagactcgactccccaggatacaagtttacaagac
tcgcagaatgtcaagtcatatgttggtagcgattgcacagtcagtcaggcaacaaactta
acatccccagccacccccattggtactgtctttcccagcatgggtgaagaaatggctttc
cacactgctataaccagcagctccacagtaatggtaactgctcacacctggaatccggct
gctgaactgagtgggctgggtacatcaaatgtacaagatctgaatagtgaactcttgctg
aagcagttgcatgtcgagaattcacaacagaggccccagcacagaaaactcacatcccat
ccacgcttcaaaagaagacacaagtccagtgaggatttacctcgaactgttcccatcaac
agcaaagcctccctgcccttccagcctcccccacccagcctggactctctgggccccatg
gcccaacttacccagctcccactagtgcctctagacccagaggagctgtgggtgcacgag
ggctgcatcgtgtggaccagtggcgtatacctggtgaacgggagactgtatggccttcag
gaggcgctagatggtgctagagacaccagctgctcccattgtgagatggtgggctccacc
ctgggctgctacagtaaaggctgcaccctgaggtaccactacctttgtgccatagaagca
gattgttccctaaatgaagacaacttttctctgaggtgtccaaagcacaagagcaacaga
atcgccaagcctggagccgtgtacctggagcagtcagagagaggatga
DBGET
integrated database retrieval system