Pimephales promelas (fathead minnow): 120468847
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Entry
120468847 CDS
T08155
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A
KO
K11489
polycomb group RING finger protein 5
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120468847 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120468847 (pcgf5a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
120468847 (pcgf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-RING_10
zf-Nse
zf-RING_6
E3_UbLigase_R4
DUF3337
TRAF3_RING
DUF678
DUF1272
zf-C3HC4_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
120468847
NCBI-ProteinID:
XP_039513433
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MATHRKHLVRDFNRHITCSICHGYLIKPTAVTECLHTFCKSCIIQHFEESNECPECGIQV
HETNPLEMLRLDKTLEEIIFKLVPGLREKEEQQESEFWRKNKIKANGEDGPRAKKARLSD
EEDEDGKGGDYHRSDPQIAICLDCLRNNSQSGESTVKGLMKKFIRCSTRVTVGTIKKFLC
VKLKLPSSYELDVLCNGEIMGKDHTLEFIYRTRWRLQGDSAYPMVLEYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaccggaaacacctggtccgagattttaaccgtcacattacctgctcaatt
tgccatggatacctgatcaagcccaccgctgtcacggaatgcctgcacactttttgtaag
agttgtatcattcagcactttgaggagagtaatgagtgtccagaatgtgggatacaggtc
catgaaaccaaccctttagagatgctgaggctagataaaaccctggaggagatcatcttc
aagctggtgcctggactaagagagaaggaggaacaacaggaaagtgagttttggagaaaa
aataaaatcaaagcaaatggagaagatggcccaagggctaagaaagctcgcctaagtgat
gaagaggatgaggacgggaaaggtggagactaccacaggagtgatcctcagatcgctatt
tgtctggactgtctacgtaacaatagccaatcaggagaaagcactgttaagggtttaatg
aagaaattcatccgttgctccacccgtgttacggtgggaaccattaagaagttcctctgt
gtaaaattgaagctgccaagctcttatgagctcgacgttttgtgtaacggggagatcatg
ggcaaagaccacaccctggaattcatctatcgcactcgctggagacttcagggtgacagc
gcttatcccatggttctcgaataccgtccaaggattgactttggttaa
DBGET
integrated database retrieval system
